Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02538 ATGATACTAATTCATAAGTCACACACTATGATTGCATCATTTGTTTCAACACTACTACTTCTTATAGTGGGAGTAGTGAATTCATATCCAGAAGGTGATAAGATAAGCAGTTTGCCAGGCCAGCCACGTGTCACATTTCAGCAATATGCTGGCTACATTACTGTCGATGACAACCATGATAGAGCTTTGTTTTATTATTTTGTTGAAGCTGAATCAAACCCTGCTTCCAAGCCACTAGTTCTTTGGTTGAATGGAGGGCCTGGTTGTTCTTCGGTTGGAGTTGGAGCTTTTGTTGAGAATGGTCCTTTCAGACCCGGTGACAACAATATTCTTCTCAAAAATGATTATAGTTGGAATAAAGAGGCAAACATGCTATATTTGGAATCACCAGCTGGAGTTGGTTTCTCATACTCTAGCAATAAATCTTTCTATGACTTGGTTACCGATGAGATAACAGCAAGGGATAATCTTATATTCTTAGAGCGCTGGTTTGCTAAATTTCCTGAGTATGCAAAAAACGACTTCTTCATTACTGGGGAGAGCTATGCAGGTCACTATGTTCCACAACTTGCATTTCTTGTTATTCAATCCAACACCACCTTCAATGTTAATCTTAAGGGAATAGCGTTAGGGAATCCTCTGCTGGATTTTAATGTTGACATGAATTCGGAAGCGGATTATTTATGGTCTCATGGGCTAATATCTGATTCGACATACGAACTGTACAATACAATATGCAACTCTTCTCAATATATGAGAGAATCTATAGATGGAAAGATTAGTGCTGATTGTGCAAGAGTAAATAATGTATCGTCCAGCGAGATATCCGATTATGTTGATCAATATGATGTCACTCTTGATGTTTGTTTGTCACCAGCCAAACAACAAGTTTATATGCTCACAAATCAAATGCATGCTACACAAAATGTAGATGTTTGTGTGGGAGATAAATTAGTGGTATACTTAAATAGGAAAGATGTGCAACAAGCACTCCATGCTAGACTTGTTGGAGTTACCAAATGGTCAACTTGCAGCACGGTTCTGAATTATGACTATCATAATCTAGAAATACCAACACTTCCTCTTCTAGGTACATTTGTTGAGTTGGGTATTCGGGTTCTCGTATACAGTGGAGACCAAGATTCAGTGATCCCATTAATTGGATCAAGATTTCTGGTGAATGCATTAGCCAAAGAAATTGGACTCAATACAACAGTGCCCTATGGAGTCTGGTTTCAGGGAAAACAGGTAGCGGGATGGACACAAGAATATGGCAAGATATTATCATATGCGACGATTAGAGGAGCATCTCATGAAGCTCCATTCTCTCAACCAGCCAGATCGTTAGTGCTACTTCAAGCATTTCTTCAAGGAAAACCACTTTCCAATAATATATGA 1398 0.387 MILIHKSHTMIASFVSTLLLLIVGVVNSYPEGDKISSLPGQPRVTFQQYAGYITVDDNHDRALFYYFVEAESNPASKPLVLWLNGGPGCSSVGVGAFVENGPFRPGDNNILLKNDYSWNKEANMLYLESPAGVGFSYSSNKSFYDLVTDEITARDNLIFLERWFAKFPEYAKNDFFITGESYAGHYVPQLAFLVIQSNTTFNVNLKGIALGNPLLDFNVDMNSEADYLWSHGLISDSTYELYNTICNSSQYMRESIDGKISADCARVNNVSSSEISDYVDQYDVTLDVCLSPAKQQVYMLTNQMHATQNVDVCVGDKLVVYLNRKDVQQALHARLVGVTKWSTCSTVLNYDYHNLEIPTLPLLGTFVELGIRVLVYSGDQDSVIPLIGSRFLVNALAKEIGLNTTVPYGVWFQGKQVAGWTQEYGKILSYATIRGASHEAPFSQPARSLVLLQAFLQGKPLSNNI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02538 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Adu10g02538 465 Gene3D alpha/beta hydrolase 31 464 IPR029058 -
Adu10g02538 465 PANTHER CARBOXYPEPTIDASE 9 461 - -
Adu10g02538 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 461 IPR001563 GO:0004185|GO:0006508
Adu10g02538 465 Pfam Serine carboxypeptidase 40 458 IPR001563 GO:0004185|GO:0006508
Adu10g02538 465 SUPERFAMILY alpha/beta-Hydrolases 36 461 IPR029058 -
Adu10g02538 465 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Adu10g02538 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Adu10g02538 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Adu10g02538 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Adu10g02538 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02538 Adu-Chr10 101863040 101866664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02538 321 461 Calmodulin-binding Proteins AT2G22960 31.206 2.77e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02538 K16297 - gmx:100799900 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02538 10 101863040 101866664 Adu10g02538 10 101863040 101866664 ECH