Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02522 ATGAGTATCATGAAGTCATTGGATCACTGGAGGAGTTACTTCAGGTCTTGTTCATCTTCATCTGACATATTTGAAATAATTGACCATGCGATCATGGTGGCGGCTTCTGATTGCCCCAAGGAGTTCAGGCTGAGAAGGGACCATATTGCTGAGATGCTCTTCTCTTGCAAGCAAACAAGGTGTGTGGGTTGTGACAGGGTTGAGCTCTGTGTCCCTGTTGATGGTGCTGATGGTGGTGGAGCTCGTGGTGGTGGTGATGATGATGATGGTGCCTACAAGAGCAGTGGTTTTCATCACAATCGGGATGGTGTTGTTGAGTTTGAAGCTGGGGCAAGCAAGGAGAGCAAGGTCAATAGCTCAAGGGGTGATATTGATGATCATGGTGACATGGATGTGAATAGGGTCCTTAGCAATTATAGCTTTGGTGAAGCTGAGGCATTGACTGATGAAATGGAAGAACAGTCTCAGTTTGTTGCTGAGGTCTTGAGGATCAGAGACATTCTCCATAACCGTCAAGAAGAGTCAGATGCAGTATTGTTTGAATCACTGAGGAGGCTGCAACTGATGGAACTCACTGTTGATTGTCTCAAGGCAACTGAGATTGGAAAGGCTGTTAATCCTCTTAGAAAGCATGCTTCAAAGGATATCCGTCAACTCGCACGAAAGCTTATTGATGATTGGAAAGAAATGGTAGATGAGTGGGTCAAGGCCACAGCTATTACAGGATCAGAAGGCACTCCAGATTCTGTAAATCCATCAGTTGTTGATGAAGAGGAAGGACTTCCATCACCTCCTTTGGACGAAGGCGCTTTCTTGGTAGCTTCAACCGGTTCAATTGAACTCTCTCAGTTCTTTGATGGCATGGATGATATCGGAAGATGTTTTTCAGATCCTCGACAAAGTGGGCAAGTCAAGAACCGAGAAAATGGCAGAAAGCCATCAATGGACATCCAACATATGGAAAAAAGGAAACCACAGGCTTCAAATGACACTGCCAAGGATAGTAAGAGCCAGCTGGTTAAGAGAAATGAGGCCACAGTGAAGCCAAGTAGACCGGTAGCCGCTGATTCCGGTCCTGGCAGACCACCAAAGTCAAGCATGCAGCGAAAAAGCAATGTCGAGCCTAGAACAGAGAATGGTACAGTCACAAGGAAGCCTCCGGTTGACCAGCAAGATAAATCGAATTGCTCGGACGATGTGGATGCGAAGCTAGAAGCCACTAAGAGGAAACTTCAGGTTCGATATCAAGAAGCTGAAAAAGCTAAGAGGCAACGAACTATACAAGTAATGGAATTGAATGATCTCCCAAAGCAAGGAGCCAGCCAGCGAAATCCTCAGTTCAAAGCCGGAAACCTTAACCGGCACTGGGCCAACGGTCGAAGGTAG 1386 0.4632 MSIMKSLDHWRSYFRSCSSSSDIFEIIDHAIMVAASDCPKEFRLRRDHIAEMLFSCKQTRCVGCDRVELCVPVDGADGGGARGGGDDDDGAYKSSGFHHNRDGVVEFEAGASKESKVNSSRGDIDDHGDMDVNRVLSNYSFGEAEALTDEMEEQSQFVAEVLRIRDILHNRQEESDAVLFESLRRLQLMELTVDCLKATEIGKAVNPLRKHASKDIRQLARKLIDDWKEMVDEWVKATAITGSEGTPDSVNPSVVDEEEGLPSPPLDEGAFLVASTGSIELSQFFDGMDDIGRCFSDPRQSGQVKNRENGRKPSMDIQHMEKRKPQASNDTAKDSKSQLVKRNEATVKPSRPVAADSGPGRPPKSSMQRKSNVEPRTENGTVTRKPPVDQQDKSNCSDDVDAKLEATKRKLQVRYQEAEKAKRQRTIQVMELNDLPKQGASQRNPQFKAGNLNRHWANGRR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02522 461 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 156 238 IPR035441 -
Adu10g02522 461 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 149 243 IPR035441 -
Adu10g02522 461 MobiDBLite consensus disorder prediction 292 401 - -
Adu10g02522 461 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 460 - -
Adu10g02522 461 Pfam TFIIS helical bundle-like domain 183 231 IPR017923 -
Adu10g02522 461 MobiDBLite consensus disorder prediction 433 461 - -
Adu10g02522 461 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 460 IPR044805 -
Adu10g02522 461 MobiDBLite consensus disorder prediction 304 341 - -
Adu10g02522 461 MobiDBLite consensus disorder prediction 364 390 - -
Adu10g02522 461 MobiDBLite consensus disorder prediction 242 267 - -
Adu10g02522 461 SMART TFS2_5 158 233 IPR003617 GO:0005634
Adu10g02522 461 MobiDBLite consensus disorder prediction 435 451 - -
Adu10g02522 461 Coils Coil 401 424 - -
Adu10g02522 461 CDD TFIIS_I 159 232 - -
Adu10g02522 461 ProSiteProfiles TFIIS N-terminal domain profile. 159 234 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02522 Adu-Chr10 101647579 101651254 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Adu10g02522 Med26 1.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02522 - - gmx:100775579 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02522 10 101647579 101651254 Adu10g02522 10 101647579 101651254 ECH