Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02517 ATGGGAAGACGAACTACCTCCGCCGGAGGAACTCATGCCCTTATCGCAAACCCTAATCACACCCGATCTTGCCATCGCCTTCGACATCCCCAGTCCTCACACCCCAACCGCCGCCGCCACCGCCACCCCAACCACCCCGAACCACCACCTCCACCACCACCAACAACCACAGCAACCGCAACCACCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCTTCCCCCTCGCATCAGCAACAACCCTCCTCCGGCGGCGACTTCGCCGACTCCGGCGATCTTGGCTCCGGCGCCGCCGGTGAGGAGCCAGCCAGAACCCTCAAGAGGCCCCGCCTCGTTTGGACCCCACAGCTCCACAAGCGCTTCGTCGACGCCGTCGCACACCTCGGAATCAAGAACGCGGTTCCGAAGACCATAATGCAGCTCATGAGCGTTGACGGCTTGACCCGAGAGAACGTCGCCAGCCACCTCCAGAAGCAGCAGCCGCCGCCGCAGAATCAGCAGCAGCAGTTCAATAGAATGGGTGGAGGTGTGGCTGGATATGCAGAGGATATGGAATCTGCTAATGCATCTGGTGCAAGGAAGGTTCTTACTCTTTTTCCAACTGGAGATGATTGA 624 0.5673 MGRRTTSAGGTHALIANPNHTRSCHRLRHPQSSHPNRRRHRHPNHPEPPPPPPPTTTATATTFXXXXXXXXXXXXPSPSHQQQPSSGGDFADSGDLGSGAAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKQQPPPQNQQQQFNRMGGGVAGYAEDMESANASGARKVLTLFPTGDD 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02517 207 MobiDBLite consensus disorder prediction 1 110 - -
Adu10g02517 207 Pfam Myb-like DNA-binding domain 115 161 IPR001005 -
Adu10g02517 207 Gene3D - 108 164 - -
Adu10g02517 207 MobiDBLite consensus disorder prediction 22 44 - -
Adu10g02517 207 MobiDBLite consensus disorder prediction 155 179 - -
Adu10g02517 207 SUPERFAMILY Homeodomain-like 108 162 IPR009057 -
Adu10g02517 207 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 112 161 IPR006447 GO:0003677
Adu10g02517 207 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 34 162 - -
Adu10g02517 207 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 34 162 IPR044841 GO:0003700|GO:0006355
Adu10g02517 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 116 167 IPR017930 -
Adu10g02517 207 MobiDBLite consensus disorder prediction 155 176 - -
Adu10g02517 207 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02517 Adu-Chr10 101567087 101567847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02517 167 207 G2-like Transcription Factor Family AT3G10760 56.522 1.31e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu10g02517 Myb_DNA-binding 1.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02517 - - aip:107623693 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02517 10 101567087 101567847 Adu10g02517 10 101567087 101567847 ECH