Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02509 ATGAATGACCTTTTGGCTAGCAAATCCTTCGTCTCACGCAATGGCTCGCCGGACGACCATGCCATCGAAATCAACCCCGGCGCGGCGGGAGCCACCCTAGACCAATTCTTCGCCGACGTGGAGGCGACGAAAGATGAAATGAAGAATCTAGAGAACATTTTCCAGAGCCTCAAAAGCCTCAACGAAGAGAGCAAAACCCTTTACGACGCCACCGCCGTGAAGGACCTCCGTTCACGTATGGACGCTGACGTGGCACTTGCCCTCAAGAAAGCCAAGTTCATCAAGCTCAAGCTGGAGACTCTCGAAAGTTCCAACGCCTCCTCCCGCCGCGTCCCCACCTGTGGGCCTGGCTCCTCCTCCGACCGCACACGGATGTCCGTCGTGCATGGGCTGAAGATGAAGCTGAAGAACTCCATGGACGCCTTCAATGGGCTCAGGAACCAGATCTCGGCGGAGTATCGGGACACAGTACAGCGCCGGTATTTCACGATTACCGGCGAGAAACCCGATGAGAAGACCGTTGAGATATTGATCTCCACGGGTGAGAGTGAGTCACTTGTACAAAAAGCCATAGAAGAACATGGAAGGGGAAGAATAGTTGAGACATTGAAGGAGATAGAGGAGAGGCACGATGCAGTGAAAGAGATAGAGAGGAGGCTGATGGAGTTGCAGCAAGTGTTCTTGGACATGTTAGTGTTGGTGCAATCTCAAGGGGAACAACTTAATGACATCGAAAGCTTTGTCACAAAAGCTAACTCCTTCGTGGAGAGCGGTACTCGGCAGGTGGAGGTGGCGGTGAAGACCCAGAAGAGTACCCGCAAATGGACATGCTATGCCATTATCCTTATTATTCTCATCATCTTCCTCCTCCTCTTGCTCCTCAAACCATGGCAACCTAATAAGGGAGTTCAACTCACCCATGCTGTTCCTAAAACTTTATAG 942 0.517 MNDLLASKSFVSRNGSPDDHAIEINPGAAGATLDQFFADVEATKDEMKNLENIFQSLKSLNEESKTLYDATAVKDLRSRMDADVALALKKAKFIKLKLETLESSNASSRRVPTCGPGSSSDRTRMSVVHGLKMKLKNSMDAFNGLRNQISAEYRDTVQRRYFTITGEKPDEKTVEILISTGESESLVQKAIEEHGRGRIVETLKEIEERHDAVKEIERRLMELQQVFLDMLVLVQSQGEQLNDIESFVTKANSFVESGTRQVEVAVKTQKSTRKWTCYAIILIILIIFLLLLLLKPWQPNKGVQLTHAVPKTL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02509 313 PANTHER SYNTAXIN-121 20 292 - -
Adu10g02509 313 ProSitePatterns Syntaxin / epimorphin family signature. 209 248 IPR006012 GO:0005484|GO:0006886|GO:0016020
Adu10g02509 313 SUPERFAMILY t-snare proteins 32 258 IPR010989 GO:0016020|GO:0016192
Adu10g02509 313 Coils Coil 206 226 - -
Adu10g02509 313 PANTHER SYNTAXIN 20 292 IPR045242 -
Adu10g02509 313 Gene3D - 199 295 - -
Adu10g02509 313 SMART tSNARE_6 198 265 IPR000727 -
Adu10g02509 313 CDD SynN 33 190 IPR006011 GO:0016020
Adu10g02509 313 Gene3D - 30 163 - -
Adu10g02509 313 Pfam SNARE domain 239 291 IPR000727 -
Adu10g02509 313 CDD SNARE_syntaxin1-like 202 263 - -
Adu10g02509 313 SMART SynN_4 28 154 IPR006011 GO:0016020
Adu10g02509 313 Pfam Syntaxin 35 238 IPR006011 GO:0016020
Adu10g02509 313 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 203 265 IPR000727 -
Adu10g02509 313 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02509 Adu-Chr10 101498993 101500536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02509 1 296 SNARE and Associated Proteins AT1G61290 57.807 2.10e-120 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02509 K08486 - jre:108982862 353.984