Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02507 ATGGATAACGAGATCGACGTTCCTCCGTTCTTTCTCTGCCCAATCTCGCTTGAAATCATGAAGGATCCAGTAACCGTCTCCACCGGCATCACCTACGACAGAGAGAGCATCGAGACATGGCTCTTCTCCGCCAAGAACAACACCTGCCCCGTAACCAAGCAACAACTATCTTCTTCTGATTTCTCCGATCTAACTCCAAACCACACTCTTCGCCGATTGATTCAGTCATGGTGTACCATCAACGCTTCCTACGGCATCCAAAGGATTCCCACACCTAAACCACCGGTCAACAGAAACCAGATCTCAAAGCTCCTCAAAGATGCTTCCCGTTCCACCACCGTCAACCAGATCAAGTGTCTCAGAAAGCTCAAATCCATTGCTTCTGGAAGCGAAACAAACAAAAGGTGCATGGAAGCTGCTGGTGCCGTTGACTTCTTGGCTTCCGTTGTCAACAACAACATCGATTGTTCTTCTTCTGATCATCACGACGACGATGATGATGATGAAGCTTTGAAGAATAGTCCCTCCGATGAAGCACTAAGCATGCTCTACAATCTTCATGTATCCGAAGCTGGATTGAAGAATCTCATAGGATTCAAGAACGGAGAGTTTGTGAATTCTCTAACGAGGATTTTGCAGAAAGGAACATACGATTCAAGAGCTTACGCAGTTTTCATGCTGAAATCAATGTGTGAGGTGGCTGAACCGGTTCACCTTCTTCACTTAAGAACCGAGTTATTCGTGGAGCTAGTTCAGGTTTTGAAGGACCAGATTTCTCACAAGGCAACAAAAGCCGCCCTCCACGCTCTGATCCAGATCTCTTCGTGGGGGAGAAACAGGATCAGAGCGGCAGAGGCCGGCACAGTTGCCGTTCTCGTGGAGCTTCTTCTCGAAACTAAAGAGAGGAAGCCCTGCGAGATGATGCTAGTTTTAGGAAATGTAGAATCACTTGTGAAGCTACTGGTTGATTGCATCTTGGAAGCCAAAGAAAATATTGATGGAAACTTTGCTGCTTCTCTTCATAATGAAAACATGGACAAAACAGATGATAAATTAAAGATTAGGAGCTGCAATGATGATGAATTAAGTCTTCCTTATGCTACATTGTGTCTGGTGACATCTACAGCTGACGTTCTGACCCTCATGAAACTCAGTGAGGTCAACCGTGCTGTCAATTCCGTTGCACTTAACAATAGGAATAGTCGTTCCCACAGCAGCAAGGACCTCGAAACGGTGGCTGTAGGAAGACTTCAAGAGCCAGATATCAATGCTGGGGTGGTTACTTTGATTCAAAGCAACCCCAATAGCTCCAAGCCTCCAATTTAG 1326 0.4585 MDNEIDVPPFFLCPISLEIMKDPVTVSTGITYDRESIETWLFSAKNNTCPVTKQQLSSSDFSDLTPNHTLRRLIQSWCTINASYGIQRIPTPKPPVNRNQISKLLKDASRSTTVNQIKCLRKLKSIASGSETNKRCMEAAGAVDFLASVVNNNIDCSSSDHHDDDDDDEALKNSPSDEALSMLYNLHVSEAGLKNLIGFKNGEFVNSLTRILQKGTYDSRAYAVFMLKSMCEVAEPVHLLHLRTELFVELVQVLKDQISHKATKAALHALIQISSWGRNRIRAAEAGTVAVLVELLLETKERKPCEMMLVLGNVESLVKLLVDCILEAKENIDGNFAASLHNENMDKTDDKLKIRSCNDDELSLPYATLCLVTSTADVLTLMKLSEVNRAVNSVALNNRNSRSHSSKDLETVAVGRLQEPDINAGVVTLIQSNPNSSKPPI 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02507 441 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 87 IPR013083 -
Adu10g02507 441 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB23 3 311 - -
Adu10g02507 441 Gene3D Kinesin motor domain 341 430 IPR036961 -
Adu10g02507 441 CDD RING-Ubox_PUB 11 54 IPR045210 -
Adu10g02507 441 ProSiteProfiles U-box domain profile. 6 84 IPR003613 GO:0004842|GO:0016567
Adu10g02507 441 SUPERFAMILY ARM repeat 101 325 IPR016024 -
Adu10g02507 441 SMART Ubox_2 10 77 IPR003613 GO:0004842|GO:0016567
Adu10g02507 441 Pfam U-box domain 7 79 IPR003613 GO:0004842|GO:0016567
Adu10g02507 441 PANTHER WDSAM1 PROTEIN 3 311 IPR045185 GO:0061630
Adu10g02507 441 SUPERFAMILY RING/U-box 4 83 - -
Adu10g02507 441 Gene3D - 97 340 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02507 Adu-Chr10 101459365 101461254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02507 1 311 U-box Gene Family AT2G35930 53.968 1.40e-115 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02507 - - adu:107471540 567.77