Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02492 ATGAACGACTTGCTCTCTCCACCGCGGGACAAGAACCAGCATGTCATCGAGATGGCGGAAACGACGCCGTCCGTCGAGAACAACCTCAACAAGTTCTTCGAGGAAGTTGAGTCCCTAAAACAAGAGCTGAAAGAGCTCGAGAACATCCACAACAGCCTCCGAGTCTCCAACGAGAAGAGCAAGGCTCTCCACACCGCAAAGGATGTGAAGGACCTTCGCTCTCGTATGGATGCTGATGTCACCACCGCCCTCAGGAAGGCCAGGGTCCTCAAGGCCCGCTTGGAGGCCCTTGACCGGGCTAACGAGGCTAGTCTGTCCGTCCCTGGCTGCGGGCCTGGCTCTTCCTCTGACCGGACACGGACGTCTGTGGTGAATGGACTGAGAAAGAACCTCAAGGAGTCAATGGAGAGTTTCAACAAACTGAGAGATCAGATATCGTCGGAGTATAGAGATACCGTACAACGTCGGTACTACACCGTCACCGGCGAGAATCCTGATGACAAAACCATTGACCTTCTCATCTCTACCGGTGAGAGTGAAACTTTCCTCCAGAAAGCAATCCAACAACAAGGGAGAGCGACAGTGATGAACACAATTCAAGAGATTCAGGAGAGGCACGGTGCGGTGAAAGAGATAGAGAGGAACCTGAAGGAGCTTCACCAGGTGTTCTTGGACATGTCAGTGTTGGTCCAAACACAGGGTGAACAGCTCGACGACATTGAGAGCCACATGGCACGTGCTAATTCGTACGTTAGGGGTGGTGTACAGCAACTCCAAGTTGCTAGAAAGCACCAGAAGAACACCCGCAAGTGGACCTTTATTGCCATCATATTGCTTCTCATAATCGCCTTGGCTATAATTCTTCCCATAGTTTTGAGAAACTGA 885 0.5153 MNDLLSPPRDKNQHVIEMAETTPSVENNLNKFFEEVESLKQELKELENIHNSLRVSNEKSKALHTAKDVKDLRSRMDADVTTALRKARVLKARLEALDRANEASLSVPGCGPGSSSDRTRTSVVNGLRKNLKESMESFNKLRDQISSEYRDTVQRRYYTVTGENPDDKTIDLLISTGESETFLQKAIQQQGRATVMNTIQEIQERHGAVKEIERNLKELHQVFLDMSVLVQTQGEQLDDIESHMARANSYVRGGVQQLQVARKHQKNTRKWTFIAIILLLIIALAIILPIVLRN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02492 294 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 10 288 - -
Adu10g02492 294 Coils Coil 124 148 - -
Adu10g02492 294 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 199 261 IPR000727 -
Adu10g02492 294 CDD SynN 29 186 IPR006011 GO:0016020
Adu10g02492 294 ProSitePatterns Syntaxin / epimorphin family signature. 205 244 IPR006012 GO:0005484|GO:0006886|GO:0016020
Adu10g02492 294 SMART tSNARE_6 194 261 IPR000727 -
Adu10g02492 294 SMART SynN_4 24 150 IPR006011 GO:0016020
Adu10g02492 294 Pfam SNARE domain 235 287 IPR000727 -
Adu10g02492 294 Gene3D - 25 154 - -
Adu10g02492 294 SUPERFAMILY t-snare proteins 27 254 IPR010989 GO:0016020|GO:0016192
Adu10g02492 294 CDD SNARE_syntaxin1-like 198 259 - -
Adu10g02492 294 Gene3D - 188 292 - -
Adu10g02492 294 PANTHER SYNTAXIN 10 288 IPR045242 -
Adu10g02492 294 Coils Coil 29 56 - -
Adu10g02492 294 Pfam Syntaxin 31 234 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02492 Adu-Chr10 101165731 101168487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02492 28 272 SNARE and Associated Proteins AT3G11820 71.020 1.05e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02492 K08486 - gmx:100808718 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02492 10 101165731 101168487 Adu02g02637 02 92084860 92086934 PCT