Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu10g02490 | ATGGCTGCTGCTACAGCTTCTGTTTCCTCTTCTTCTTCTATCTGCAACAGAATCTACAACCCCACCTTCACCCACACTTCCATTTCACTCACCACCAACTTCCCTCAGAGACCCATCTCCTACAAACCCCTCACCTTCAACCTCAAGCCCCAAAGTTTCAATCTTTTCCCTCTCCCTCTTCACCCTTCCTCCGCTGCATTCGATGGATTCGAAGCCTCTCAAGAACAAGAACAAGAAGAGACCTCTGAAACACCCCAACAACAAGAAGAGCAAAGGGTTTCAGATTCCAACGACTCTGGGAGGCTCTATGTTGGAAACTTGCCATATTCAATGACCTCCAACGAATTGTCCGAGCTCTTTGGAGAAGCTGGCACTGTTGTGTCTGTTGAGGTTGTGTACGATCGTGTCACGGATAGAAGTAGAGGATTTGCATTTGTTACAATGGGGAGTGTTGGGGATGCTCAAGAAGCAATTCGAATGTTTGATGGCTCGCAAGTTGGCGGTAGGACCGTTAAGGTAAACTTCCCGGAAGTGCCCAAGGGAGGTGAAAGGTTGGTAATGGGGCCGAGAATTCGGAACAACTCCAGAGGCTTTGTAGACAGCCCTCACAAGCTCTATGCTGGAAACCTTGGTTGGAGACTGACTTCAGAGGGTCTTAGAGATGCCTTCGCTGAGAAGCCAGGCTTATTGAGTGCCAAGGTCATCTATGAGAGAGACTCCGGAAGATCTCGAGGTTTTGGATTCGTTACTTTTCAAACTGCGGAGGATGTAGAGGCTGCTTTGAATGCTATGAACGGTGTGGAGATTGAAGGTCGACCTTTAAGGTTGAATTTGGCTGCAGAGAGAGCACCTTCATCTCCTCCAAGAAGTAATGTTGATAGCTCAGAGTTGTATTCTAGGGCCAGTACATGA | 912 | 0.4803 | MAAATASVSSSSSICNRIYNPTFTHTSISLTTNFPQRPISYKPLTFNLKPQSFNLFPLPLHPSSAAFDGFEASQEQEQEETSETPQQQEEQRVSDSNDSGRLYVGNLPYSMTSNELSELFGEAGTVVSVEVVYDRVTDRSRGFAFVTMGSVGDAQEAIRMFDGSQVGGRTVKVNFPEVPKGGERLVMGPRIRNNSRGFVDSPHKLYAGNLGWRLTSEGLRDAFAEKPGLLSAKVIYERDSGRSRGFGFVTFQTAEDVEAALNAMNGVEIEGRPLRLNLAAERAPSSPPRSNVDSSELYSRAST | 303 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu10g02490 | 303 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 100 | 178 | IPR000504 | GO:0003723 | |
Adu10g02490 | 303 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 203 | 281 | IPR000504 | GO:0003723 | |
Adu10g02490 | 303 | CDD | RRM_HP0827_like | 101 | 177 | - | - | |
Adu10g02490 | 303 | SMART | rrm1_1 | 101 | 174 | IPR000504 | GO:0003723 | |
Adu10g02490 | 303 | SMART | rrm1_1 | 204 | 277 | IPR000504 | GO:0003723 | |
Adu10g02490 | 303 | PANTHER | OS02G0815200 PROTEIN | 2 | 290 | - | - | |
Adu10g02490 | 303 | MobiDBLite | consensus disorder prediction | 281 | 303 | - | - | |
Adu10g02490 | 303 | Gene3D | - | 63 | 183 | IPR012677 | - | |
Adu10g02490 | 303 | MobiDBLite | consensus disorder prediction | 70 | 101 | - | - | |
Adu10g02490 | 303 | PANTHER | RNA-BINDING PROTEIN CP33, CHLOROPLASTIC | 2 | 290 | - | - | |
Adu10g02490 | 303 | MobiDBLite | consensus disorder prediction | 87 | 101 | - | - | |
Adu10g02490 | 303 | MobiDBLite | consensus disorder prediction | 287 | 303 | - | - | |
Adu10g02490 | 303 | Gene3D | - | 187 | 293 | IPR012677 | - | |
Adu10g02490 | 303 | SUPERFAMILY | RNA-binding domain, RBD | 200 | 290 | IPR035979 | GO:0003676 | |
Adu10g02490 | 303 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 205 | 275 | IPR000504 | GO:0003723 | |
Adu10g02490 | 303 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 102 | 172 | IPR000504 | GO:0003723 | |
Adu10g02490 | 303 | SUPERFAMILY | RNA-binding domain, RBD | 95 | 178 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu10g02490 | Adu-Chr10 | 101159271 | 101161190 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu10g02490 | 100 | 300 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 28.856 | 4.76e-16 | 76.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu10g02490 | - | - | adu:107471351 | 570.466 |