Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02489 ATGGCGAAGCAAAGTGTTTATCCTAATAAGGAACATGAAGGGATTGCTCACAATTCTTCAGGGCCCTGGTGGAGTCTCTTTGGATCTCAATATGGGGAATCTTGTGGCCAAATGAAACCCTTTTCACTGGAGATTCCTAACTATGTTGATCAAATTGACACCGGCAAGCAATCGGCGAGAGGAGCTGAAAACATATCTGGGAAAGGACATACAACTCAGTTTACCATCTTTCCAGATGATTGTAAAATGCCATGTGGTGCACAAAAGCCTCAAGCAGCCATATCTCTGCAGTCACCACTTGCTGATACTAACACTAGATTCGAGCTAGGATTCAACCAGCCAATGATCTGTGCAAAATATCCATATATGGATCAAATTTATGGGCTCTTCTCACCTTATGGACCTCAAATTTCGGGACGCATAATGCTGCCACTTAGCATGACATCCGATGATGGACCAATTTATGTGAATGCTAAGCAGTACCATGGAATCATCAGACGCCGGCAGTCCCGTGCCAAAGCTGTACTTGATAACAAATTGACAAAACGTCGCAAGCCATATATGCATGAATCACGTCATCTCCATGCAATGCGGCGACCAAGAGGATGTGGCGGTCGCTTCTTGAACACGAAGAATTCCGATGATCAAAATGATAAAAGTGGAAACAAAGTGATCAAAGCTCTTGGCGAACAGTTGCAATCTTGTGGCTCTCAGAGTTCTGAAGTGCTGCAATCTGAGGTTGGAACTCTGAATTCTTCAAAAGAGACTAATGGAAGCAGTCCGAATATTTCCGGGTCAGAGGTGACTAGCATGTATTCACGCGGAGGTCTCGATAGTTTTGCTATCAGTCATCTTGGTTCTGCCGTCACTGTCCACTCTCTAGTGGACATGATAGACGGCGGGAGGGGCATGAATATGATCATGCCCCCCAAATGGGTTGCAGCAGTTGGTGGCAATTGCTGCAACCTTAATGCTTGA 978 0.4519 MAKQSVYPNKEHEGIAHNSSGPWWSLFGSQYGESCGQMKPFSLEIPNYVDQIDTGKQSARGAENISGKGHTTQFTIFPDDCKMPCGAQKPQAAISLQSPLADTNTRFELGFNQPMICAKYPYMDQIYGLFSPYGPQISGRIMLPLSMTSDDGPIYVNAKQYHGIIRRRQSRAKAVLDNKLTKRRKPYMHESRHLHAMRRPRGCGGRFLNTKNSDDQNDKSGNKVIKALGEQLQSCGSQSSEVLQSEVGTLNSSKETNGSSPNISGSEVTSMYSRGGLDSFAISHLGSAVTVHSLVDMIDGGRGMNMIMPPKWVAAVGGNCCNLNA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02489 325 MobiDBLite consensus disorder prediction 198 221 - -
Adu10g02489 325 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 5 324 - -
Adu10g02489 325 ProSiteProfiles NF-YA/HAP2 family profile. 150 210 IPR001289 GO:0003700|GO:0006355
Adu10g02489 325 SMART cbf3 149 210 IPR001289 GO:0003700|GO:0006355
Adu10g02489 325 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 153 207 IPR001289 GO:0003700|GO:0006355
Adu10g02489 325 Gene3D - 150 212 - -
Adu10g02489 325 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 5 324 IPR001289 GO:0003700|GO:0006355
Adu10g02489 325 PRINTS CCAAT-binding transcription factor subunit B signature 153 175 IPR001289 GO:0003700|GO:0006355
Adu10g02489 325 PRINTS CCAAT-binding transcription factor subunit B signature 184 207 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02489 Adu-Chr10 101154517 101158667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02489 1 323 CCAAT-HAP2 Transcription Factor Family AT3G05690 44.412 3.57e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Adu10g02489 CBFB_NFYA 7.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02489 K08064 - gmx:100527677 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02489 10 101154517 101158667 Adu02g02617 02 91927786 91928192 PCT