Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02482 ATGGGAAACAATTGTGTTGGATCCAGAGACTCCAAGGAAGGACTATTCTCCTTCTCCTATGTTGCTTCCACCCCATTCTGGTGGTCTAATCCAACAACCGCAATCCTAGAACCTCCTTCATGCACACAACCTGTTCAACAAAATGCTCCACAGCCCATCACGATTGATGCTCATCATCAACACTATTACAAACAAGAGGAGGATAAGCAGCAATCTAGGCAAGTAGTAGTTAGACCAGAAGAGACACCAAAAGCAAAACTTCAAAGTACTAAGAGGTCTGCAAGTGCAGGGCTTCGAGCAGACTCGGTTCTGCCGAGACAAACCGGCCACATTAAAGAGTACTTTCATTTGGGAGCTGAGCTTGGGCATGGACAATATGGAACAACTTTTCTTTGTGTAGAGAAGGCTACTGGAATCAAGTATGCATGCAAGTCCATTGCAAAAGTGAAGTTGCTTACAGATGATGATGTGGATGATGTGAGGAGGGAGATTCAGATAATGCATCACTTGGCGGGAAGCCCCAATGTGGTCTCCATCAAAGGGGCTTACGAGGATGCCATTGCGGTTCATGTTGTCATGGAGTTGTGTGCAGGGGGTGAGCTCTTTGATAGGATTGTGGAAAGGGGCCATTACACGGAAAAGAAGGCGGCAAAGCTTGTCAGGACTATTGTCAGTGTTGTGGAGGCTTGCCACTCCCTTGGAGTTATGCATCGTGATCTTAAGCCAGAGAATTTCCTTTTTCTTGATGTCCATGAAGATTCCATCCTCAAGGCAATAGATTTTGGAATGTCTGCTTTTTTCAAACCAGGAGACAAATTCACCGATGTGGTAGGAAGTCCTTACTATATTGCACCCGAAGTTCTGTGCAAGCATTATGGCCCAGAAGCAGATGTTTGGAGTGCTGGTGTGATGCTATACATTCTCTTATGTGGATTCCCTCCATTTTGGGGCGAATCAGAGCAAGAGATATTTCACGAGGTTTTGAATGGTGATCTTGATTTCTCTTCTGATCCTTGGTCGAGTATCTCTGAAAGTGCGAAAGACTTGGTGAGGGGCATGCTTGTTAGAGATCCAAGAAAACGGATTACAGCTCATGAAGTTCTTTGTCACCCTTGGATTCAAGAAAATGGAGTTGCTCCAGACAAGCCTTTAGATTCTACGGTTTTGAGTCGCCTGAAGCAGTTTTCTGCAATGAACAAGCTCAAGAAAATGGCTCTCAGAATTATTGCAGAGAATCTCTCTGAAGAAGAAATTTCAGGATTGAAAGAAATATTCAAGATGATAGACACGGACAACAGTGGTCAAATAACTTTTGAAGAATTCAAGGTTGGGCTGAGAACGTTTGGTGCTAATCTCAGCGAATCAGAAATTTACGATCTAATGCAAGCTGCAGATGTTGATAACAGTGGCACAATTGAGTATGGGGAATTCATAGCTGCAACAATGCATTTAAACAAAGTCAAAAGAGAAGAACATTTGGTCACAGCTTTCTCATACTTTGATAAAGATGGAAGTGGCTACATCACTCAAGATGAGCTTCAACAAGCTTGTGAAGAATTTGGCATGGAGGATGTCAGCTTGGATGAAATCATCCGAGAAGCTGATCAGAATAACGATGGCAGAATAGACTACAATGAATTTGTTGCAATGATGCAGAGAGGAGATACAGATTTAGGAAAGACTGGTGTAAAAGGTAGCACTAGTTTTAGAATTGGATTTAGGGAAGCACTTTCAGGGGAGAGTCTAAGGGAAGAAAATTTTTTGCATGAACCTTTACACACTCCTATCTTACATATTGAGGATACAACTTTCACTAATCAAGTAAATTGTGAAACAATTGCAAAACAAGATGTGGAAACCAATTCTGAAATTGTGCCAGAATTAGTTAGAATCCAAATAGGAAAAGAAATACCACAAGAAAAGGAGCTTCGGTGTTATGTTCGGAAATATCCCAAGAAGACTAGAGACCAGCCCATCATCTCTGTACCAGCCCAATCTGAAAACCCGAAAGACGGCCCAACTATAGTACTTCAGGAACTTCCAGTCACACGCCCTCCTCCTTCTCCTTATTCTCCTTCTCCAACATCATCATTGTCGCTGCCGCTATCACCATCACCACCACCACCACCACCACTGTTGTCGTCCACTGTCACCACCACCACCGTCGTCGCTGGTGCTGCTGCCACCGTTGTCGTCCACCATCACCACCACCGTCCTTCTTCTTCTTCTTCTTCTTCTTGTCGCTTCCGCCATCACCATCACCACCACCACTGTTGTCGTCCACTGTCACCACCACCACCGTCGTCGCTGGTGTTGCTGCCACCGTTGTCATCCACCATCACCACCATCGTCCTTCTTCTTCTTCTTCTTGTCGCTTCCGCCATCACCATCACCACCACCACCACTATTGTCGTCCACTGTCACCACCACCACCGTCGTCGCTGGTGCTGCTGCCACCGTTGTCGTCCACCATCACCACCACCGTTGCTTCTTCTTCGACTCATTTTTTGgatatga 2517 0.4482 MGNNCVGSRDSKEGLFSFSYVASTPFWWSNPTTAILEPPSCTQPVQQNAPQPITIDAHHQHYYKQEEDKQQSRQVVVRPEETPKAKLQSTKRSASAGLRADSVLPRQTGHIKEYFHLGAELGHGQYGTTFLCVEKATGIKYACKSIAKVKLLTDDDVDDVRREIQIMHHLAGSPNVVSIKGAYEDAIAVHVVMELCAGGELFDRIVERGHYTEKKAAKLVRTIVSVVEACHSLGVMHRDLKPENFLFLDVHEDSILKAIDFGMSAFFKPGDKFTDVVGSPYYIAPEVLCKHYGPEADVWSAGVMLYILLCGFPPFWGESEQEIFHEVLNGDLDFSSDPWSSISESAKDLVRGMLVRDPRKRITAHEVLCHPWIQENGVAPDKPLDSTVLSRLKQFSAMNKLKKMALRIIAENLSEEEISGLKEIFKMIDTDNSGQITFEEFKVGLRTFGANLSESEIYDLMQAADVDNSGTIEYGEFIAATMHLNKVKREEHLVTAFSYFDKDGSGYITQDELQQACEEFGMEDVSLDEIIREADQNNDGRIDYNEFVAMMQRGDTDLGKTGVKGSTSFRIGFREALSGESLREENFLHEPLHTPILHIEDTTFTNQVNCETIAKQDVETNSEIVPELVRIQIGKEIPQEKELRCYVRKYPKKTRDQPIISVPAQSENPKDGPTIVLQELPVTRPPPSPYSPSPTSSLSLPLSPSPPPPPPLLSSTVTTTTVVAGAAATVVVHHHHHRPSSSSSSSCRFRHHHHHHHCCRPLSPPPPSSLVLLPPLSSTITTIVLLLLLLVASAITITTTTTIVVHCHHHHRRRWCCCHRCRPPSPPPLLLLRLIFWI 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02482 838 CDD EFh 496 552 IPR002048 GO:0005509
Adu10g02482 838 Gene3D Phosphorylase Kinase; domain 1 117 200 - -
Adu10g02482 838 SMART serkin_6 115 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g02482 838 ProSitePatterns EF-hand calcium-binding domain. 535 547 IPR018247 -
Adu10g02482 838 ProSitePatterns Protein kinases ATP-binding region signature. 121 148 IPR017441 GO:0005524
Adu10g02482 838 SUPERFAMILY EF-hand 412 553 IPR011992 -
Adu10g02482 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Adu10g02482 838 ProSitePatterns EF-hand calcium-binding domain. 465 477 IPR018247 -
Adu10g02482 838 Pfam Protein kinase domain 116 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g02482 838 ProSiteProfiles EF-hand calcium-binding domain profile. 527 557 IPR002048 GO:0005509
Adu10g02482 838 CDD EFh 421 480 IPR002048 GO:0005509
Adu10g02482 838 ProSiteProfiles EF-hand calcium-binding domain profile. 488 523 IPR002048 GO:0005509
Adu10g02482 838 ProSitePatterns EF-hand calcium-binding domain. 501 513 IPR018247 -
Adu10g02482 838 SMART efh_1 420 448 IPR002048 GO:0005509
Adu10g02482 838 SMART efh_1 526 554 IPR002048 GO:0005509
Adu10g02482 838 SMART efh_1 456 484 IPR002048 GO:0005509
Adu10g02482 838 SMART efh_1 492 520 IPR002048 GO:0005509
Adu10g02482 838 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 72 562 - -
Adu10g02482 838 MobiDBLite consensus disorder prediction 64 97 - -
Adu10g02482 838 ProSitePatterns EF-hand calcium-binding domain. 429 441 IPR018247 -
Adu10g02482 838 ProSiteProfiles EF-hand calcium-binding domain profile. 452 487 IPR002048 GO:0005509
Adu10g02482 838 Gene3D - 383 556 - -
Adu10g02482 838 ProSiteProfiles EF-hand calcium-binding domain profile. 416 451 IPR002048 GO:0005509
Adu10g02482 838 Gene3D Transferase(Phosphotransferase) domain 1 201 382 - -
Adu10g02482 838 Pfam EF-hand domain pair 421 481 IPR002048 GO:0005509
Adu10g02482 838 Pfam EF-hand domain pair 491 552 IPR002048 GO:0005509
Adu10g02482 838 SUPERFAMILY Protein kinase-like (PK-like) 113 748 IPR011009 -
Adu10g02482 838 PANTHER SERINE/THREONINE-PROTEIN KINASE 72 562 - -
Adu10g02482 838 MobiDBLite consensus disorder prediction 680 714 - -
Adu10g02482 838 ProSiteProfiles Protein kinase domain profile. 115 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g02482 838 MobiDBLite consensus disorder prediction 679 714 - -
Adu10g02482 838 CDD STKc_CAMK 115 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02482 Adu-Chr10 100984200 100994283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02482 91 574 EF-hand Containing Proteins AT5G04870 75.620 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Adu10g02482 Pkinase 7.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02482 K13412 - gmx:100783079 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02604 02 91819869 91832215 Adu10g02482 10 100984200 100994283 PCT