Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02479 ATGGAGAAGGTACCAGGGATGGAAGGCAAGGCTGAGAGTCAAATGACTTCGGCTGCGGCCTTCGTCGAAGGAGGGATTCAAGAATCATGTGATGATGCTTGCAGCATATGCCTTGAGGATTTCTCCGAAAGTGATCCTTCGACAACCACTGCATGCAGGCATGAGTTTCACCTTCAATGTGTTCTTGAATGGTGCCAGAGAAGCTCTCAGTGCCCTATGTGTTGGCAACCTATTAGCATGAAGGATCCAACCAGTCAAGAGCTGTTTGAGGCAGTAGAACGGGAAAGGAAGTTGAGGGCTATCGCACCAAGGACTGCTGCTATCTTTCACCACCCTGCCTTTGGTGATTTTGGACTGCAGCATTTAGGCATAAGTGATGCTGATCTTGAACAACGAATAATTCAACATTTAGCTGCAGCAGCAGCAGTTGGGAGATCACACCATCATGGTCGGAGGGAAGGGCATCAAACTAGGGCATCTGCTCATGGTCATCCACCCGTTATAGTTTTGTCATCTCAGCCAAGTTCACCGCAAGTCCCTGAATCAGCTCCTAGAGGGGGAGATGAACCAGCTACAAATCCTTTAGGAACTCCATCTAGTCCTATGACTTCCCGTGGAGGTGAAATATCACGGCAGATCCCACATCTTCAGACTCAAAGCTCTTCTTCAGCTCCTCGGGATAGAGACTCTATTGCGCAATCTTCTCCAGCAAACCAAGATAGAGCAGGGCCATCAGAATCCCAGTCCATTTCTGATTCTCTGCGGGCCCGATTTAGTGCGTTGTCCATGAGATACAAAGAGTCAATTTCAAAAGGCGCAAGGGGATGGAAGGAGAGGCTGTTCTGTCATGGTTCTTCCATGTCAAAAGTTGGCTCAGAAGCTAGGAGAGAGGCTGGAATTGCCGGCGTCACACAATTGGTGCAATCCCAATCTCTTCAAAATAGAGCAACTTATAGAACTGCGACTACCTCTTTGTCAAATCATTTGGAGGATCATCCCACTGGAGAGGTGACCAACCAGAACAGGGGAGCTAGAAGAGAAAATGCATCGCATGATAACACTCCAGCTGCTTGTTCTGCTAGCTCACGTTCGAATTGA 1098 0.4827 MEKVPGMEGKAESQMTSAAAFVEGGIQESCDDACSICLEDFSESDPSTTTACRHEFHLQCVLEWCQRSSQCPMCWQPISMKDPTSQELFEAVERERKLRAIAPRTAAIFHHPAFGDFGLQHLGISDADLEQRIIQHLAAAAAVGRSHHHGRREGHQTRASAHGHPPVIVLSSQPSSPQVPESAPRGGDEPATNPLGTPSSPMTSRGGEISRQIPHLQTQSSSSAPRDRDSIAQSSPANQDRAGPSESQSISDSLRARFSALSMRYKESISKGARGWKERLFCHGSSMSKVGSEARREAGIAGVTQLVQSQSLQNRATYRTATTSLSNHLEDHPTGEVTNQNRGARRENASHDNTPAACSASSRSN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02479 365 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 9 362 - -
Adu10g02479 365 SUPERFAMILY RING/U-box 26 82 - -
Adu10g02479 365 MobiDBLite consensus disorder prediction 193 252 - -
Adu10g02479 365 MobiDBLite consensus disorder prediction 140 252 - -
Adu10g02479 365 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 9 362 - -
Adu10g02479 365 SMART ring_2 34 74 IPR001841 -
Adu10g02479 365 Pfam Ring finger domain 33 74 IPR001841 -
Adu10g02479 365 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 84 IPR013083 -
Adu10g02479 365 MobiDBLite consensus disorder prediction 322 365 - -
Adu10g02479 365 MobiDBLite consensus disorder prediction 322 344 - -
Adu10g02479 365 ProSiteProfiles Zinc finger RING-type profile. 34 74 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02479 Adu-Chr10 100948119 100952997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02479 31 82 C3H Transcription Factor Family AT4G00335 48.077 2.03e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02479 K19043 - gmx:100800419 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02479 10 100948119 100952997 Adu10g02479 10 100948119 100952997 ECH
Adu10g02479 10 100948119 100952997 Adu02g01278 02 38552260 38554907 PCT