Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02455 ATGTTGTCTTGTTCCGTTGCCAAAATCCGATTCTTCATCAAACCGCCTCCATGCATTTTGCTCTTCTTCCTTCTCTCTTTCACCTCCTTCACTTCAACAGAAGCATATGATGTGCTTGATCCAAACGGAAATATCACAATCAGATGGGATATTATAAGCTGGACACCAGATGGTTATGTTGCTGTTGTTACATTAAACAATTTCCAGCAATACCGCCACATCTCGGCGCCAGGGTGGTCGCTAGGGTGGACATGGGCAAAGAAAGAGGTAATATGGAGCATGATGGGAGGGCAGACTACCGAACAAGGCGATTGCTCGAAATTCAAGACAACCCCACCACATTGCTGTAAAAAGGACCCAACCGTTGTAGATTTACTTCCCGGAACACCATACAATCAACAAATTGCAAATTGTTGCAAAGGAGGTGTACTCAGCTCATGGGCACAGGATCCGGCAAATGCCATTGCATCATTTCAAATCAGTGTTGGTAGAGCTGGAACCTCTAACAAAACAGTCAAAGTGCCCAAGAACTTCACCTTGAAAGCACCGGGACCGGGTTATACGTGTGGGCCGGGAAAAATTGTTCAACCTACTCAATTCTTAACAGGAGATAAAAGAAGAAGGACTCAAGCTCTCATGACATGGAATGTGACATGCATGTATTCACAATTTCTAGCTCAGAAAACTCCCACTTGCTGTGTTTCACTCTCATCTTTCTATAATGATACCATTGTACCCTGCCCGACATGTTCGTGTGGCTGCCAGGGAAACTCTTCTCAATCCGGGAACTGTGTAGATCCAGATACACCGCATTTGGCATCGGTTGTTGCTAACCCTGCAAAGAGTTCCCCTTTCGTTCAATGTACTCGCCATATGTGTCCTGTTCGAGTTCATTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTCACTATTACTAATTTCAATTACAAGATGAACTATACAGATTGGAACTTGGTTATTCAACACCCGAATTTCGACAATCTGACTCAGCTTTTTAGTTTTAACTACAAGTCATTGACACCCTATGGCACAATAAATGATACAGCATTGCTATGGGGAATTAAGTTCTACAATGATTTGCTCATGGAAGCCGGTCCGGAAGGTAATGTACAATCAGAGCTACTCTTCCGAAAGGATAAATCAACTTTTACTTTCGACAAAGGTTGGGCGTTTCCTCGGAGGATCTATTTCAATGGTGACAACTGTGTGATGCCACCACCTGATGCTTATCCGTGGTTGCCAAATGCCAGTTCCCGGCGAGAGGTTTCCTTGCTAGCTTTAGTGCTGGCTTCCTTTGTAGTCTTTGCATTGTGCGCATATGCTTAA 1359 0.4408 MLSCSVAKIRFFIKPPPCILLFFLLSFTSFTSTEAYDVLDPNGNITIRWDIISWTPDGYVAVVTLNNFQQYRHISAPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKFKTTPPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPANAIASFQISVGRAGTSNKTVKVPKNFTLKAPGPGYTCGPGKIVQPTQFLTGDKRRRTQALMTWNVTCMYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCQGNSSQSGNCVDPDTPHLASVVANPAKSSPFVQCTRHMCPVRVHWHVKLNYKEYWRVKVTITNFNYKMNYTDWNLVIQHPNFDNLTQLFSFNYKSLTPYGTINDTALLWGIKFYNDLLMEAGPEGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRREVSLLALVLASFVVFALCAYA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02455 452 PANTHER PROTEIN COBRA 11 450 IPR006918 GO:0010215|GO:0031225
Adu10g02455 452 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0031225
Adu10g02455 452 PANTHER COBRA-LIKE PROTEIN 11 450 - -
Adu10g02455 452 PIRSF COBRA 9 452 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02455 Adu-Chr10 100447746 100450927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02455 4 446 COBRA Gene Family AT3G02210 74.273 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02455 - - gmx:100783820 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02455 10 100447746 100450927 Adu04g02968 04 117900015 117908838 PCT
Adu04g02969 04 117912212 117914785 Adu10g02455 10 100447746 100450927 PCT