Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02429 ATGTTTTCTTCTTCTTCTTCTTTTCGTTCCAGTTCAGTGATCAAATGGAGCACCTTCACTTCTCAGTTCCACTTTATGTTCCTCCTTTTCCTCCTCCTATTTTCGTTTCACAAAAACGACGCCGTTTCACCCTCTTCCGACAAATCCCTACTTCTCAAGCTCAAAGACTCTATCTCCGACCCCTCCGGCATGCTCTCCACGTGGATCCCCACCGCCGGCAACGACTCCGACCACTGTTCATGGCGCGGCGTGCTCTGCGACTTGGCCTCGCCGCCGCGCGTAGTAGCCATCAACCTCACCGGAAACGGCCGGAGCAGCCGAAGCTTCTGCTCCGATTTCGCTCAATTCCCTCTATACGGCTTCGGAATCAGGCGGAGCTGCAACGGCAGCGGCGGTTCCCTCTTCGGAAAGCTCCCGCCGGTTATCGGCGACCTTTCCGAGCTCAGGATCCTCTCTCTCCCCTTCAACGGCATTGACGGCGAGATTCCCGGCGAAATTTGGGGGTTGCGGAACTTGGAGGTGCTTGATCTAGAAGGGAACTTGGTGACCGGTCACCTACCGTTACGGTTCGAAGGTTTGAAGAAGCTGAGGGTTCTGAATTTAGGGTTCAACAGAATCATTGGAGAGATACCGAGCTCAATTGTATCACTCGAGAGCTTGGAGGTTCTGAATTTGGCTGCTAATGGTTTGAATGGTTCTGTTCCTGGTTTCTTAGGGAGGCTTAGAGGGGCGTATCTGTCATTTAACGAGCTCGTCGGCGTTATCCCGGAGGAGATAGGGGATAATTGTGGGAGCCTTGAGCATCTGGATTTGTCAGGGAACTTCTTGGTCCAGGGCATTCCGGTAAATTTAGGTAACTGTACCGGGTTGAAGACTCTGCTTCTGTATTCGAATCTTTTGGTAGATGCCATTCCCAGTGAAATCGGAAAGCTTAAGAGCCTTCAAGTGTTGGATGTTTCGAGGAACACGCTCAGTGGTCCGGTGCCACGCGAGCTAGGGAACTGCTCGGAGTTGTCTGTCCTTGTGCTCTCAAACCTCTTTGATCCCACCGGAGGTGCGGTGAGGGATTCTGGGGATGATTCTTCAGCAGGGCAGCCAGTTTCTGTGAACGACGAATTCAATTATTTTGAAGGTGCATTGCCTGCGGAGGTTGCACTGCTTCCAAAACTGAGATTGTTGTGGGCTCCCATGGTTAACCTGGAAAATGATTTTCCAAGAAATTGGGGCAGTTGTGACAGGTTGGAGGTGGTTAATTTGGCTCAGAATTACTTCACCGGGGAGTTCCCCAACCAGCTTAGGTCCTGCAAGAAGCTGCATTTCCTTGATTTGAGCTCAAATAACTTCACTGGTCAAATTCCTTCCAGCCTTGGTCAATTGAAGGATCTAAGGTTTCTCTCTTTGGCACGCAATAATTTAAGTGGCTCGATTCCTTCAATCTTGGGGCAGTTGCACTACTTAGAAGTCTTGGACCTCTCTTCCAACTCGCTTACTGGTGAGATCCCTGAGGCTATTGTGAACATGAGAAACCTGACTGATGTGCTCCTCAACAACAACAAGCTTTCTGGCCACATACCTCCTGGTTTGGCTAGCCTCCGTACGCTCTCTGCATTTAATGTGTCTTTCAATAACTTATCTGGGTCCTTGCCATCACATAGCAGCTTAATTAAATGCAGCAGTGCTGTGGGGAATCCTCTTATACGTTCTTGTCGTGGATTTTCTCTCTCTGTGCAATCACCAGATCAACAAGGGCAAGCAACAGATAATTCTGAGAGTGCTGCACCAGAACAGGCTTCTAGCAGTAAGAGTGGGTTCAACTCCATTGAAATAGCATCCATAACTTCTGCATCAGCCATTGTTTCTGTTCTTATAGCGCTAGTGATTCTGTTCCTTTACACAAGGAAGTGGAAACCAATGTCCAGGGTTGCTGGGTCCACAAGAAAAGAGGTCATTGTCTTCACTGATATCGGGGTTCCATTGACATATGAAGATGTTGTCCGTGCCACTGGGAATTTCAATACAAGCAACTGTATTGGGAATGGAGGGTTTGGGACAACCTACAAGGCAGAGATATCACCAGGGACTTTGGTGGCAGTCAAACGCCTGGCAATTGGACGCTTTCAAGGTGGCAATCTGGAAAAATTTATCCAGGAGAGGTCAACAAGAGCTGTGGATTGGAGAATTCTTCACAAGATTGCATTAGACATAGCCCGTGCACTTGCCTACCTGCATGATCAGTGTGTACCTCGAGTTCTCCATCGAGATGTCAAGCCCAGCAACATCTTGTTGGATGATGATTTCAATGCGTATCTGTCCGACTTTGGATTGGCCAGGCTTCTGGGTACTTCAGAGACCCATGCTACCACTGGTGTAGCAGGAACATTTGGTTATGTGGCTCCTGAATATGCCATGACATGCCGTGTTTCTGATAAGGCCGATGTGTATAGTTATGGTGTTGTGCTTCTAGAGCTGCTCTCAGACAAGAAAGCATTGGATCCTTCATTCTCCTCTTACGGGAATGGCTTCAACATAGTAGCATGGGCATGCATGTTACTGAGGCAAGGCAGGGCTAAGGAGTTCTTCACTGCCGGGTTGTGGGATGCAGGACCAGGAGATGATTTGGTAGAAGTCCTACACTTGGCAGTTGTGTGCACGGTGGACTCCCTCTCTACCAGACCGACGATGAAACAAGTTGTGAGACGGCTTAAACAACTTCAGCCCCCATCATGCTAG 2730 0.4901 MFSSSSSFRSSSVIKWSTFTSQFHFMFLLFLLLFSFHKNDAVSPSSDKSLLLKLKDSISDPSGMLSTWIPTAGNDSDHCSWRGVLCDLASPPRVVAINLTGNGRSSRSFCSDFAQFPLYGFGIRRSCNGSGGSLFGKLPPVIGDLSELRILSLPFNGIDGEIPGEIWGLRNLEVLDLEGNLVTGHLPLRFEGLKKLRVLNLGFNRIIGEIPSSIVSLESLEVLNLAANGLNGSVPGFLGRLRGAYLSFNELVGVIPEEIGDNCGSLEHLDLSGNFLVQGIPVNLGNCTGLKTLLLYSNLLVDAIPSEIGKLKSLQVLDVSRNTLSGPVPRELGNCSELSVLVLSNLFDPTGGAVRDSGDDSSAGQPVSVNDEFNYFEGALPAEVALLPKLRLLWAPMVNLENDFPRNWGSCDRLEVVNLAQNYFTGEFPNQLRSCKKLHFLDLSSNNFTGQIPSSLGQLKDLRFLSLARNNLSGSIPSILGQLHYLEVLDLSSNSLTGEIPEAIVNMRNLTDVLLNNNKLSGHIPPGLASLRTLSAFNVSFNNLSGSLPSHSSLIKCSSAVGNPLIRSCRGFSLSVQSPDQQGQATDNSESAAPEQASSSKSGFNSIEIASITSASAIVSVLIALVILFLYTRKWKPMSRVAGSTRKEVIVFTDIGVPLTYEDVVRATGNFNTSNCIGNGGFGTTYKAEISPGTLVAVKRLAIGRFQGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACMLLRQGRAKEFFTAGLWDAGPGDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPPSC 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02429 909 Gene3D Ribonuclease Inhibitor 368 573 IPR032675 -
Adu10g02429 909 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524
Adu10g02429 909 SUPERFAMILY L domain-like 44 346 - -
Adu10g02429 909 Gene3D Transferase(Phosphotransferase) domain 1 706 906 - -
Adu10g02429 909 SMART LRR_typ_2 311 335 IPR003591 -
Adu10g02429 909 SMART LRR_typ_2 169 192 IPR003591 -
Adu10g02429 909 SMART LRR_typ_2 263 287 IPR003591 -
Adu10g02429 909 SMART LRR_typ_2 193 217 IPR003591 -
Adu10g02429 909 SMART LRR_typ_2 459 483 IPR003591 -
Adu10g02429 909 SMART LRR_typ_2 507 531 IPR003591 -
Adu10g02429 909 MobiDBLite consensus disorder prediction 576 600 - -
Adu10g02429 909 Gene3D Ribonuclease Inhibitor 44 241 IPR032675 -
Adu10g02429 909 ProSiteProfiles Protein kinase domain profile. 593 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g02429 909 SMART serkin_6 671 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g02429 909 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 441 706 - -
Adu10g02429 909 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 707 908 - -
Adu10g02429 909 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 21 447 - -
Adu10g02429 909 Gene3D Ribonuclease Inhibitor 242 351 IPR032675 -
Adu10g02429 909 Pfam Leucine Rich Repeat 265 287 IPR001611 GO:0005515
Adu10g02429 909 Pfam Leucine Rich Repeat 195 217 IPR001611 GO:0005515
Adu10g02429 909 Pfam Leucine rich repeat 462 520 IPR001611 GO:0005515
Adu10g02429 909 Pfam Leucine rich repeat N-terminal domain 45 87 IPR013210 -
Adu10g02429 909 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 707 908 - -
Adu10g02429 909 SUPERFAMILY Protein kinase-like (PK-like) 657 902 IPR011009 -
Adu10g02429 909 Pfam Protein kinase domain 707 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g02429 909 SUPERFAMILY L domain-like 304 569 - -
Adu10g02429 909 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 441 706 - -
Adu10g02429 909 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 21 447 - -
Adu10g02429 909 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02429 Adu-Chr10 100132799 100136106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02429 128 909 Receptor kinase-like Gene Family AT3G02130 50.478 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Adu10g02429 Pkinase 7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02429 - - han:110937472 921.383