Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02358 ATGGAGGCTCCGCATTCTGTTAAAGTTATAACGGTGTCACAGGACGGAAAAGGAGACTACCGGACGGTGCAGGAGGCTATCGATGCGGTGCCGGTAGGCAACACTCGCCGGACGGTGATCCGGGTGGCCCCGGGAACCTACCGGCAGCCTGTTTATGTGGCGAAAACAAAGAGGTTCATCACGCTTTCCGGCATATTCCTTGAGGACACTGTTCTCACATGGAATAACACTGCTGCAAGAATCCAACACCACAAAGGTGAAAAGGTGATAGGAGGAGGAACGTTTGGTTGTGGCAGCACCATTGTGGAAGGTGAAGACTTCATTGCTGAGAACATTACCTTCGAGAATTCTTCCCCTCAGGGTTCAGGGCAAGCTGTGGCAATGAGAGTAACAGCTGATCGATGTGCTTTCTATAATTGCAGGTTCCTTGGATGGCAGGACACACTGTATTCACATTATGGCAAACAATATTTTAGAGATTGCTACATTGAAGGAAGTGTGGACTTCATTTTCGGCAATAGCACTGCACTCTTGGAGCATTGTCATATCCACTGCAAATCTCAAGGCTTCATAACAGCACAGAGCAGAAAATCTCCACATGAAACAACTGGTTTTGTGTTCCAAAGATGTGTTATCACAGGTAATGGGGGAAGGGAATATGCATATCTTGGAAGACCATGGGGACCCTTTGCAAGAGTGGTCTTTGCATTCACTTATATGGATCCATGTATACAACTTGCTGGTTGGAACAATTGGGGTAAAGCTGACAATGAGAAAACTGCTTGCTTTTTTGAATACAGGTGTTTCGGGCCGGGTTATTGCCGATCAAAACGGGTCAAATGGGCCAGAGAAGAAGCAGAACAGTTCTTGCTTCATAGCTTCATTGATCCAGAAGCAAATAAACCTTGGCTTGCTCAAAGAATGGCCTTCAAGGTTCCATATTTTGCTTAG 951 0.4627 MEAPHSVKVITVSQDGKGDYRTVQEAIDAVPVGNTRRTVIRVAPGTYRQPVYVAKTKRFITLSGIFLEDTVLTWNNTAARIQHHKGEKVIGGGTFGCGSTIVEGEDFIAENITFENSSPQGSGQAVAMRVTADRCAFYNCRFLGWQDTLYSHYGKQYFRDCYIEGSVDFIFGNSTALLEHCHIHCKSQGFITAQSRKSPHETTGFVFQRCVITGNGGREYAYLGRPWGPFARVVFAFTYMDPCIQLAGWNNWGKADNEKTACFFEYRCFGPGYCRSKRVKWAREEAEQFLLHSFIDPEANKPWLAQRMAFKVPYFA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02358 316 Pfam Pectinesterase 10 288 IPR000070 GO:0030599|GO:0042545
Adu10g02358 316 ProSitePatterns Pectinesterase signature 2. 163 172 IPR033131 -
Adu10g02358 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 9 314 - -
Adu10g02358 316 SUPERFAMILY Pectin lyase-like 8 299 IPR011050 -
Adu10g02358 316 Gene3D - 5 311 IPR012334 -
Adu10g02358 316 PANTHER PECTINESTERASE 9 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02358 Adu-Chr10 99116911 99122046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02358 4 309 Carbohydrate Esterase AT5G47500 39.185 1.67e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02358 K01051 - gmx:100810259 541.576