Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02333 ATGGCTCTTCTTGGGTTCCTTCTTCTGGTGTTTATCTCCATGCTCTCATATGTTAGTGCCTATGGATATGGTGGTTGGATCAATGCACATGCCACATTCTATGGTGGTAGTGATGCTTCTGGAACAATGGGTGGAGCTTGTGGATATGGAAACTTGTACAGCCAAGGGTGTGGGACAAACACAGCAGCACTAAGCACAGCATTGTTCAACAATGGATTAAGCTGTGGAGCATGTTATGAAATAAGGTGTGCAAATGACCCACAGTGGTGTTCTCCTGCCTCAATTGTAGTAACCGCCACTAACTTCTGCCCCCCTGGTGGTTGGTGTGACCCTCCAAATCACCATTTTGATCTCTCTCAGCCTGTTTTTCAGCAAATTGCTCAGTATAAAGCTGGCGTTGTTCCTGTCATTTACAGAAGGGTGAGGTGCAAGAGAAGAGGGGGAATAAGGTTCACCATAAATGGCCACCCATACTTCAATTTAGTCCTAGTAACAAATGTTGGAGGTGCTGGTGATGTGCATGGTGTAGCCATCAAAGGTTCAAGAACTAGATGGCAAGCAATGTCAAGAAACTGGGGGCAAAATTGGCAAAGCAACTCTTACTTGAATGGACAAAGCCTTTCATTTGTAGTTACCACAAGTAATGGCCACAGTGTGGTATCTTACAATGTTGCCCCTCCAAGTTGGTCCTTTGGACAGACCTACACTGGAAGACAATTCCCTTAA 726 0.4518 MALLGFLLLVFISMLSYVSAYGYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGCGTNTAALSTALFNNGLSCGACYEIRCANDPQWCSPASIVVTATNFCPPGGWCDPPNHHFDLSQPVFQQIAQYKAGVVPVIYRRVRCKRRGGIRFTINGHPYFNLVLVTNVGGAGDVHGVAIKGSRTRWQAMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPSWSFGQTYTGRQFP 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02333 241 SUPERFAMILY PHL pollen allergen 145 237 IPR036749 -
Adu10g02333 241 Gene3D - 12 144 IPR036908 -
Adu10g02333 241 SMART dpbb_1 61 138 IPR007112 -
Adu10g02333 241 Pfam Expansin C-terminal domain 149 226 IPR007117 -
Adu10g02333 241 PRINTS Expansin signature 95 105 IPR002963 GO:0009664
Adu10g02333 241 PRINTS Expansin signature 159 180 IPR002963 GO:0009664
Adu10g02333 241 PRINTS Expansin signature 123 136 IPR002963 GO:0009664
Adu10g02333 241 PRINTS Expansin signature 194 215 IPR002963 GO:0009664
Adu10g02333 241 PRINTS Expansin signature 147 159 IPR002963 GO:0009664
Adu10g02333 241 PRINTS Expansin signature 83 94 IPR002963 GO:0009664
Adu10g02333 241 PRINTS Expansin signature 56 70 IPR002963 GO:0009664
Adu10g02333 241 PRINTS Expansin signature 106 123 IPR002963 GO:0009664
Adu10g02333 241 PRINTS Expansin signature 223 239 IPR002963 GO:0009664
Adu10g02333 241 SUPERFAMILY Barwin-like endoglucanases 25 166 IPR036908 -
Adu10g02333 241 PRINTS Expansin/Lol pI family signature 131 147 IPR007118 GO:0005576
Adu10g02333 241 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Adu10g02333 241 PRINTS Expansin/Lol pI family signature 185 199 IPR007118 GO:0005576
Adu10g02333 241 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Adu10g02333 241 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Adu10g02333 241 PRINTS Expansin/Lol pI family signature 223 237 IPR007118 GO:0005576
Adu10g02333 241 PANTHER EXPANSIN-A15 7 240 IPR002963 GO:0009664
Adu10g02333 241 PANTHER EXPANSIN 7 240 - -
Adu10g02333 241 Pfam Lytic transglycolase 61 138 IPR009009 -
Adu10g02333 241 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 158 237 IPR007117 -
Adu10g02333 241 Gene3D - 148 240 IPR036749 -
Adu10g02333 241 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 148 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02333 Adu-Chr10 98594494 98596944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02333 1 240 Expansin Gene Family AT2G03090 77.016 5.23e-138 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02333 K20628 - gmx:100791784 454.136