Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02313 ATGCCACAATATCAACCATCTAAAGAAACTTTAAAGCTTGATGCTTTTTTGGGTCTAGATAATAAGGTCCTGTTGAAAGTTGCTGAGAAATTAGAGCTGAAGGTGATGATTGAGGAAATGAAATCTTCAACAAGTATTTATGATGTTCCTGTAGTGTTCATTTGTCCAATTTCACTTGAGCCAATGCAAGAGCCAGTGACACTTTCAACTGGCCAAACCTATAAAGATCCAACATCGTCAAATAGATCTCACTTGGCCACAGAACTTGCCCCAGAACAATGCAAGAACTTTGGGGAAGGGGATGGGGGGCAGACGAGGAAGGGTAGAGAAGAAAGGGAAGAGATACGGGAGTGGGGGTGCAAGTGGAGGGGGGAAGGgtttgtttttattttttaa 396 0.4167 MPQYQPSKETLKLDAFLGLDNKVLLKVAEKLELKVMIEEMKSSTSIYDVPVVFICPISLEPMQEPVTLSTGQTYKDPTSSNRSHLATELAPEQCKNFGEGDGGQTRKGREEREEIREWGCKWRGEGFVFIF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02313 131 MobiDBLite consensus disorder prediction 68 111 - -
Adu10g02313 131 ProSiteProfiles U-box domain profile. 48 74 IPR003613 GO:0004842|GO:0016567
Adu10g02313 131 SMART Ubox_2 52 118 IPR003613 GO:0004842|GO:0016567
Adu10g02313 131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 43 78 IPR013083 -
Adu10g02313 131 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 30 22 75 - -
Adu10g02313 131 PANTHER WDSAM1 PROTEIN 22 75 IPR045185 GO:0061630
Adu10g02313 131 SUPERFAMILY RING/U-box 42 75 - -
Adu10g02313 131 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02313 Adu-Chr10 98215434 98215829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02313 1 74 U-box Gene Family AT5G65920 47.191 5.30e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02313 - - tcc:18591947 74.7146