Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02311 ATGGCTGAAGGTGTTAGTGAAGCAAACAATACTAAAGCGTCGCCATCGCCATTGCCACCAGAAGCAGAGAAGAAGAAAGAACAAAGCCTACCATTTTTCAAGCTCTTCTCATTTGCAGACAAGTATGACTACATGCTCATGATCTCTGGAACCATCGGCGCCATTGTTCATGGCTCCTCCATGCCCGTTTTCTTCCTCCTCTTCGGTCAAATGGTCAACGGTTTTGGTAAGAACCAAATGGACCTTAACAAGATGACTCAGGAAGTCTCAACGTATGCTCTTTACTTTGTGTACCTTGGCCTTGTGGTTTGCATATCATCATATGCAGAAATTTCATGCTGGATGTATAGTGGGGAGAGGCAAGTGAGTACACTAAGGAAGAAGTATTTGGAAGCAGTGCTTAAACAAGACGTAGGTTTCTTTGATACAGATGCAAGAACAGGGGATATTGTTTTCAGTGTCTCAACGGACACACTTCTTGTTCAAGATGCCATCAGTGAGAAGGTTGGGAACTTCATACATTATCTTTCAACTTTTCTGGCTGGACTTGTGGTTGGTTTTGTGTCCGCATGGAGGCTAGCACTTCTAAGTGTTGCCGTGATTCCCGGCATCGCTTTCGCCGGCGGCTTGTATGCTTACACTCTTACCGGCCTTACATCCAAGAGTCGCGAATCCTATGCCAATGCAGGCATCATTGCCGAACAGGCCATTGCGCAAGTTCGAACCGTTTACTCTTACGTTGGGGAGAGCAAGGCGCTGAACTCTTATTCAGATGCAATACAGAACACTCTGAAGCTTGGATATAACGGCGTTTTCATCCGAAATGGACAGACCGACGGAGGCAAGGCGTTCACGGCTATATTCTCGGCCATTGTTGGTGGAATGAGTTTGGGACAGTCTTTTTCGAATTTAGGCGCCTTTAGTAAAGGCAAAGCGGCCGGATACAAGTTAATGGAGATCATCAAGCAGAAACCAACAATTGTGGAGGATCCTTTGGAAGGCAAGTGCTTGGGAGAGGTTAATGGAAACATTGAATTCAAGGATGTTGGTTTTAGCTATCCCTCGCGGCCGGATGTCATGATCTTTCGCAATTTCTCAATCTTTTTCCCGGCCGGGAAAACAGTGGCGGTTGTAGGTGGTAGTGGATCAGGAAAGAGTACAGTTGTTTCCTTGATTGAAAGGTTCTATGATCCAAATGAAGGTCAAGTTCTGCTTGATAATGTGGACATCAAGACACTGCAACTAAAATGGTTGCGCGATCAAATCGGATTGGTGAATCAAGAACCTGCGCTGTTCGCAACCACCATTCTTGAGAACATACTCTATGGAAAACCTGATGCAACAATGGCTGAAGTGGAAGCAGCAGCTTCTGCTGCAAATGCTCATAGCTTTATTACCTTGCTTCCCAACGGCTATAACACTCAGGTGGGAGAACGAGGAGTGCAATTATCCGGAGGCCAAAAGCAGAGAATTGCAATTGCAAGAGCAATGTTGAAGAATCCAAAGATTCTGCTTTTGGATGAGGCAACAAGTGCTCTAGATGCAGGATCAGAGAGCATTGTTCAAGAGGCACTAGACCGGCTCATGGTGGGAAGAACAACCGTGGTTGTAGCGCATCGTCTTTCGACCATAAGAAATGTTGATACCATCGCCGTGATCCAGCAAGGACAAGTGGTGGAGACAGGAACACACGAGGAACTCATTGCCAAGGCAGGAACCTATGCATCACTAATTAGGTTCCAAGAAATGGTTGGAAATAGGGACTTCTCCAACCCCTCAACTCGCCGGACACGATCCTCCCGGCTCAGCCATTCCCTCTCTACAAAGTCCTTAAGCCTCCGATCTGGAAGCTTAAGGAACTTGAGCTACCAATACAGCACCGGAGCCGACGGCCGCATAGAAATGATATCTAATGCCGAGACGGATAAGAAGAATCCGGCCCCGGACGGATACTTCCTCCGGCTGCTGAAGATGAATGCCCCCGAATGGCCTTACTCAATCATGGGAGCCGTTGGTTCTGTTCTCTCCGGATTCATTGGGCCAACATTTGCAATTGTGATGAGTAACATGATTGAAGTCTTTTACTATAGAAACTATGCATCCATGGAGAAGAAAACCAAGGAGTATGTGTTTATATACATTGGAGCTGGACTCTATGCAGTTGGTGCATATTTGATTCAGCATTACTTTTTCAGTATCATGGGTGAGAACCTCACCACTAGGGTTAGAAGAATGATGCTTGCAGCTATATTGAGGAATGAAGTAGGATGGTTCGATGAGGAGGAACACAACTCAAGCCTGGTGGCAGCAAGGCTTGCAACGGATGCAGCTGATGTCAAGTCTGCCATTGCTGAGAGGATTTCTGTCATTTTACAGAACATGACTTCCCTCCTCACTTCTTTCATTGTTGCTTTCATTGTTGAATGGAGAGTTTCTCTTCTCATTCTTGCTACCTTCCCTCTCCTTGTCCTAGCTAATTTCGCTCAGCAACTTTCCCTAAAAGGTTTTGCTGGAGACACAGCGAAGGCGCATGCAAAAACAAGTATGATTGCTGGAGAAGGAGTGAGCAATATCCGAACCGTTGCAGCATTCAATGCACAGAACAAGATGTTATCGGTCTTCTGCCACGAGCTGCGAGTGCCGCAGATGCGAAGCCTTCGCCGGAGCCAGAGCTCCGGCATCTTGTTCGGCCTCTCGCAGCTCGCGCTTTATGCCTCCGAGGCTCTCATTCTATGGTACGGTGCACATTTGGTCAGCAAAGGAGTTTCAACCTTCTCCAAGGTCATTAAGGTCTTTGTGGTCCTTGTCATAACGGCCAATTCGGTTGCAGAGACCGTTAGCCTCGCCCCGGAGATAATTCGGGGCGGGGAAGCAGTTGGCTCTGTTTTCTCCATCCTCGACCGGCACACCAGGATCGATCCAGATGATCCTGATGCTGATCCGGTCGAGTCAATTCGTGGAGAAATCGAGCTTAGACATGTTGATTTCGCATACCCTTCGAGGCCAGATGTGATGGTTTTCAAGGATCTGAACCTCAGAATTAGGGCAGGCCAAAGCCAAGCCCTCGTCGGAGCGAGTGGATCGGGGAAGAGTTCGGTCATCGCCCTTATCGAGCGGTTCTACGATCCCATAGCCGGGAAAGTCATGGTGGACGGAAAAGACATAAGGAAGCTTAACTTGAAATCCTTGAGGCTCAAGATCGGTTTGGTCCAACAAGAACCGGCATTGTTTGCCGCCTCGATATTTGAAAACATTGCTTATGGAAAGGAGGGAGTGACGGAATCCGAGGTGATCGAGGCAGCTAGAGCTGCCAACGTGCACGCCTTTGTTAGTAGCCTGCCCGAGGGCTACAAAACACCCGTTGGCGAACGGGGCGTGCAGCTCTCGGGTGGGCAGAAACAAAGGATTGCAATTGCTAGGGCTGTCCTTAAGGACCCTACAATATTGCTTCTTGATGAAGCAACAAGTGCACTTGATGCTGAGTCAGAATGTGTGCTACAAGAGGCATTGGAGAGGCTCATGAGGGGGAGGACCACGGTGCTCGTGGCGCACCGGTTGTCCACCATAAGAGGGGTTGATTGCATTGGTGTGGTCCAAGATGGGCGCATTGTGGAACAAGGTAGCCATTCTGAGCTTATAAGCAGGCCTGAGGGTGCATATTCTAGACTCTTGCAACTACAACATCATCACATTTGA 3696 0.4808 MAEGVSEANNTKASPSPLPPEAEKKKEQSLPFFKLFSFADKYDYMLMISGTIGAIVHGSSMPVFFLLFGQMVNGFGKNQMDLNKMTQEVSTYALYFVYLGLVVCISSYAEISCWMYSGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYNGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVEDPLEGKCLGEVNGNIEFKDVGFSYPSRPDVMIFRNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTILENILYGKPDATMAEVEAAASAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTIAVIQQGQVVETGTHEELIAKAGTYASLIRFQEMVGNRDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDKKNPAPDGYFLRLLKMNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYYRNYASMEKKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKMLSVFCHELRVPQMRSLRRSQSSGILFGLSQLALYASEALILWYGAHLVSKGVSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRHTRIDPDDPDADPVESIRGEIELRHVDFAYPSRPDVMVFKDLNLRIRAGQSQALVGASGSGKSSVIALIERFYDPIAGKVMVDGKDIRKLNLKSLRLKIGLVQQEPALFAASIFENIAYGKEGVTESEVIEAARAANVHAFVSSLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELISRPEGAYSRLLQLQHHHI 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02311 1231 ProSitePatterns ABC transporters family signature. 483 497 IPR017871 GO:0005524
Adu10g02311 1231 MobiDBLite consensus disorder prediction 1 25 - -
Adu10g02311 1231 Pfam ABC transporter 1008 1156 IPR003439 GO:0005524
Adu10g02311 1231 Pfam ABC transporter 363 511 IPR003439 GO:0005524
Adu10g02311 1231 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 667 954 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu10g02311 1231 SUPERFAMILY ABC transporter transmembrane region 34 329 IPR036640 GO:0005524|GO:0016021
Adu10g02311 1231 CDD ABC_6TM_Pgp_ABCB1_D2_like 656 972 - -
Adu10g02311 1231 ProSitePatterns ABC transporters family signature. 1128 1142 IPR017871 GO:0005524
Adu10g02311 1231 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 268 1229 IPR039421 -
Adu10g02311 1231 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 23 269 IPR039421 -
Adu10g02311 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 979 1227 IPR027417 -
Adu10g02311 1231 CDD ABC_MTABC3_MDL1_MDL2 344 581 - -
Adu10g02311 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 581 IPR027417 -
Adu10g02311 1231 CDD ABC_6TM_Pgp_ABCB1_D1_like 47 317 - -
Adu10g02311 1231 SUPERFAMILY ABC transporter transmembrane region 648 968 IPR036640 GO:0005524|GO:0016021
Adu10g02311 1231 Pfam ABC transporter transmembrane region 48 291 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu10g02311 1231 Pfam ABC transporter transmembrane region 667 938 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu10g02311 1231 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 344 580 IPR003439 GO:0005524
Adu10g02311 1231 SMART AAA_5 1016 1202 IPR003593 -
Adu10g02311 1231 SMART AAA_5 371 557 IPR003593 -
Adu10g02311 1231 CDD ABC_MTABC3_MDL1_MDL2 989 1227 - -
Adu10g02311 1231 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 991 1225 IPR003439 GO:0005524
Adu10g02311 1231 PANTHER ABC TRANSPORTER TAP-LIKE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 23 269 - -
Adu10g02311 1231 PANTHER ABC TRANSPORTER TAP-LIKE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 268 1229 - -
Adu10g02311 1231 Gene3D - 335 589 IPR027417 -
Adu10g02311 1231 Gene3D ABC transporter type 1, transmembrane domain 615 977 IPR036640 GO:0005524|GO:0016021
Adu10g02311 1231 Gene3D - 979 1230 IPR027417 -
Adu10g02311 1231 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 50 275 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu10g02311 1231 Gene3D ABC transporter type 1, transmembrane domain 20 323 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02311 Adu-Chr10 98172148 98180676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02311 9 1227 Calmodulin-binding Proteins AT2G36910 52.719 0.0 1318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02311 K05658 - gmx:100797124 2186.76