Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02295 ATGGAAATGATGACAAAGAAAGAAGAGAACATGAAGAGGAGTTGGATGTCAATGCCACAAAGTGAGTTCCAAGTAGCAGCAAGGGGTAACAAGAGGAGAAGGAGAGAGCTTACCGCAGTTGCACTAACAAATGAAGAAAACCAAAGTAAGGAACAAACATTGCAGCCACACCAACAGCAACAGAAAGTTGATCCAAATTCCACTACCAACACTACAAAGAGAAGTTCAAGATTCAGGGGTGTCAGCAGACATAGATGGACAGGTCGATACGAGGCTCACTTGTGGGACAAGCTCTCTTGGAACATAACACAAAGGAAGAAAGGGAAGCAAGTTTACCTTGGGGCATATGATGAAGAAGAATCTGCTGCTAGAGCATATGATTTAGCTGCACTTAAGTACTGGGGAACATCAACTTTCACCAATTTTCCGATATCAGATTATGAGAAAGAGATTGAGATAATGCAAACTATGACAAAAGAAGAGTACTTGGCTACTCTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGTGTATCAAAGTATAGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCACGCTACCTAGGCACCTACAGCACCCAAGAAGAAGCTGCTCGTGCTTATGACATAGCAGCCATCGAGTATAGAGGGATCCATGCTGTAACCAACTTTGATTTGAGTTCTTACATACGGTGGTTAAAGCCTTCAGGGGGTAACATCTCAGAATTAAAACAGGAATCAGAGGTAACACCGAAGTCTCAGACAGTGGTATCTCAAACTCATTCACCAATAGAGGGGTCTAAATCCTTGGCCGTTCATACATTTAGTCCAGATTATCTCGATTTACCTCAAAATCATGAAATCTTTGAAAACAAAACATTCCAATTCTCCAGCAATAAGTCATCTTCTCCAACCGCACTCAGCCTGCTCCTCCGATCATCAATATTTAGAGAATTGGTTGAAAAGAATTTGAACATGTGTGGAGATGAAACTGATGGGGAAGACAAAAAGGATCAACGCCCACAGATAACTAGTGATGATGAGTTGGGTGGGATCTTTTACGATGGAATTAGCAATCTCCCTTATCTGTGA 1098 0.4226 MEMMTKKEENMKRSWMSMPQSEFQVAARGNKRRRRELTAVALTNEENQSKEQTLQPHQQQQKVDPNSTTNTTKRSSRFRGVSRHRWTGRYEAHLWDKLSWNITQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYEKEIEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSSYIRWLKPSGGNISELKQESEVTPKSQTVVSQTHSPIEGSKSLAVHTFSPDYLDLPQNHEIFENKTFQFSSNKSSSPTALSLLLRSSIFRELVEKNLNMCGDETDGEDKKDQRPQITSDDELGGIFYDGISNLPYL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02295 365 SMART rav1_2 179 233 IPR001471 GO:0003700|GO:0006355
Adu10g02295 365 SMART rav1_2 77 149 IPR001471 GO:0003700|GO:0006355
Adu10g02295 365 MobiDBLite consensus disorder prediction 329 350 - -
Adu10g02295 365 ProSiteProfiles AP2/ERF domain profile. 77 143 IPR001471 GO:0003700|GO:0006355
Adu10g02295 365 CDD AP2 76 145 IPR001471 GO:0003700|GO:0006355
Adu10g02295 365 MobiDBLite consensus disorder prediction 1 80 - -
Adu10g02295 365 CDD AP2 178 229 IPR001471 GO:0003700|GO:0006355
Adu10g02295 365 ProSiteProfiles AP2/ERF domain profile. 179 227 IPR001471 GO:0003700|GO:0006355
Adu10g02295 365 MobiDBLite consensus disorder prediction 329 346 - -
Adu10g02295 365 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Adu10g02295 365 PRINTS Ethylene responsive element binding protein signature 209 229 IPR001471 GO:0003700|GO:0006355
Adu10g02295 365 SUPERFAMILY DNA-binding domain 76 145 IPR016177 GO:0003677
Adu10g02295 365 MobiDBLite consensus disorder prediction 41 76 - -
Adu10g02295 365 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 3 360 - -
Adu10g02295 365 SUPERFAMILY DNA-binding domain 178 229 IPR016177 GO:0003677
Adu10g02295 365 Pfam AP2 domain 178 219 IPR001471 GO:0003700|GO:0006355
Adu10g02295 365 Pfam AP2 domain 76 135 IPR001471 GO:0003700|GO:0006355
Adu10g02295 365 Gene3D AP2/ERF domain 76 145 IPR036955 GO:0003700|GO:0006355
Adu10g02295 365 Gene3D AP2/ERF domain 178 229 IPR036955 GO:0003700|GO:0006355
Adu10g02295 365 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02295 Adu-Chr10 97681111 97683801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02295 73 231 AP2-EREBP Transcription Factor Family AT5G57390 66.272 1.25e-76 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Adu10g02295 AP2 2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02295 - - ahf:112716370 717.998