Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02291 ATGTTATTGTCAGCACCCATAGTGGAAGAATTATATTTGGAAGTTCTAGTGCAGATCACTTACTGTCTCAACTTTCTTGTTGGATCCGTCCTCAATCTTCCAGGGCAACCACCTAAATTTGCTTGGGGTCGTAACACTTGTGGCCTTGTGGGAGAACAAGAGAGGATTGCTTATGAACTTGCCCTCAAAACTTACGTCCCAGACCCTTTGGAAGTTACATTCGAACTCAACCATCATGTTAACTTATTCATGAACAAAACTGAATCAAGGAGGAATCTGATGAAGATAAAGAGAAGGAACAGACGTTTTATCTGTGAAGCCACCAACCCCATAGACGGTTGTTGGAGGTGCGATCCCAATTGGGCCAGAAACCGCTTCAGGCTGGCGGAGTGCGCAAAGGGATTCGGAAGAAGAGCCAAGGGAGGCTTAGGCGGCCCAATCTACGTCGTCACTGACGAATCCGACGACGACATGATAAACCCTAGACCCGGAACCCTAAGATATGGAGTCCTCCTGAGGGGACCAGTGTGGATCATATTTGCAAGAAGCACGTTGATCAACTTGAAGCAAGAGTTGATCGTGACCTCCGACAAGACGATCGACGGGCGCGGCGCCAACATTCAGATCAGGGGCGGCGCCGGGCTAACGTTGCAGTTCGTGAACAATGTTATCATTCATGGGATTCGCATCAAGGGAGTGAGGTCCAGATCTGGTGGCATGATAAGGTCAAGTGCAGATCATATTGGTCTGAGGATGAGGAGTGATGGTGATGGCATCACCATCTTTGGGTCAAGCAACGTTTGGATCGATCATATCTCCATGTCTGACTGCGAGGATGGCCTCATCGATGTTGTTGCCGGTTCCACTGGCATCACCATCTCAAATTGCCATATGACCAAACACAACGATGTGATGTTGTTTGGAGCTGATGACAGATTCACAAGGGACAAGATCATGCAAGTGACCGTGGTATTCAACCACTTCGGACAAGGATTGATTCAAAGGATGCCGAGGTGCAGATTCGGATTCTTCCATGTTCTTAACAACGACTACACCCACTGGCTCATGTACGCCATTGGAGGAAGCTCAAACCCAACAATTCTAAGCCAGGGCAACCGCTTCATCGCTCCCAACAACATGGCGGCCAAGGAGGTGACCCACCGCGACTACGCCAGGCCCGAGGAGTGGGCCAACTGGCAGTGGCGCTCGGAGAATGACCTCTTCATGAACAACGCCAGGTTTGTTGAGTCTGGAGCTCCAATTACCAATCTACCCTTCAGGGGGTTCCTCATGACCCCTCGACATGGTTCTCATGCTAACAGACTCACTAGTTATGCTGGTGCTCTTACTTGCGTTGTTGGCAGGCCTTGCTAG 1374 0.4978 MLLSAPIVEELYLEVLVQITYCLNFLVGSVLNLPGQPPKFAWGRNTCGLVGEQERIAYELALKTYVPDPLEVTFELNHHVNLFMNKTESRRNLMKIKRRNRRFICEATNPIDGCWRCDPNWARNRFRLAECAKGFGRRAKGGLGGPIYVVTDESDDDMINPRPGTLRYGVLLRGPVWIIFARSTLINLKQELIVTSDKTIDGRGANIQIRGGAGLTLQFVNNVIIHGIRIKGVRSRSGGMIRSSADHIGLRMRSDGDGITIFGSSNVWIDHISMSDCEDGLIDVVAGSTGITISNCHMTKHNDVMLFGADDRFTRDKIMQVTVVFNHFGQGLIQRMPRCRFGFFHVLNNDYTHWLMYAIGGSSNPTILSQGNRFIAPNNMAAKEVTHRDYARPEEWANWQWRSENDLFMNNARFVESGAPITNLPFRGFLMTPRHGSHANRLTSYAGALTCVVGRPC 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02291 457 Pfam Pectate lyase 190 374 IPR002022 -
Adu10g02291 457 PANTHER PECTATE LYASE 53 457 - -
Adu10g02291 457 SMART amb_all 183 380 IPR002022 -
Adu10g02291 457 Pfam Pectate lyase, N terminus 54 93 IPR007524 GO:0030570
Adu10g02291 457 PRINTS Pollen allergen Amb family signature 255 276 IPR018082 -
Adu10g02291 457 PRINTS Pollen allergen Amb family signature 191 207 IPR018082 -
Adu10g02291 457 PRINTS Pollen allergen Amb family signature 357 376 IPR018082 -
Adu10g02291 457 PRINTS Pollen allergen Amb family signature 399 423 IPR018082 -
Adu10g02291 457 PRINTS Pollen allergen Amb family signature 155 180 IPR018082 -
Adu10g02291 457 PRINTS Pollen allergen Amb family signature 131 148 IPR018082 -
Adu10g02291 457 PRINTS Pollen allergen Amb family signature 335 354 IPR018082 -
Adu10g02291 457 PRINTS Pollen allergen Amb family signature 428 451 IPR018082 -
Adu10g02291 457 Gene3D - 108 450 IPR012334 -
Adu10g02291 457 PANTHER PECTATE LYASE 18-RELATED 53 457 IPR045032 GO:0030570
Adu10g02291 457 SUPERFAMILY Pectin lyase-like 99 451 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02291 Adu-Chr10 97647777 97652602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02291 52 457 Polysaccharide Lyase AT1G14420 55.819 3.61e-169 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02291 K01728 - gmx:100810615 586.645