Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02280 ATGAGATATGGAGGAAGAAGGAGGCGAATGTTGTGTGGTGTTGTGTGCGCTGGTGACGGGTTTGGGGTTGTTGATGCTGGCGTTGAGACCGCATCGGCGGCGACAAGGATGGCGGCGACGATGCCGATGCGGCCATCGGAGTGGGGAACGCGGGTGAGGAGGGCGTGGGAGAGAAAACGTGCGCGACAGACGACAGTAGAGAAGATGGGGAAAGATTTCAGTACAAGTGTTGGGATTGAAACCCTCAGAGTCAGGAGAATTATTGACGGCAACAACAAGTTGTGGTCTCCTTTGGTGGCAGCACCATCGAAAGGCCCTTtatcagtggcggtggaaatgtgtgtgggtgctgTCGGCTATGAAAAGATCATCACTATGTCATGGCCTTCAGAAATAAAAAGCAATATTAATAACAAGGGAGGTGCAAACAAGGCTTGTGCTGCTTGCAAATTCCAAAGACGAAGGTGCACTAAGGATTGCATTCTCTCCCCTTATTTCCCATCAGATAAACCTACAACATTCACCAACGCACATCGTTTGTTTGGTGTTTGCAACATGACGAGGATTCTCAGCAAGATCAAACCAGAACAGCGGGATGAGTGCATGCAATCAATTATATTCGAGTCCGATATGCGTGCACAGTTTCCAGTAGGGGGTTGTTTAAGTATCATTCATTTGTATCAAGATCATCTAGCTAAGGTCAATGCCGAGTTACACAACGTGCAGAGGTGGATCGCTTATTTCAAACAACAAGAACAATACCACCTGCAGCAACAACAGCAGCAACAACAATATCTTTCTCTACCATTAATTATGACACCGGATCAGCCATATAATGAAAGGAAAGATAACTGCATCAACATTGTTGCTCTCCCGAGTATTGGTGGTGGTGTTAACGATAATAACGTTCAGAAAGAGAGTTCGGATGAAAAACTCAATTCAAAACTCGGAGCATTGTCAATGTGCCAACAATTTGTGGATTTAAAACCGTCAAAAGATAAATTAGGTGAATGCAGTACTTATTCTTGTCAGCAAGTTGAAAATCAAGTTTATGCAAATCAGATCGATCTGGATTCTGATCCGAAACGATTAAAGTTTTCTCCACGCAACAATACTTTTGACTACAAACACAAGGATGGAGGTCATGTCAAGGGCTTTAGAACTAACTGCTGCAACCTCCAACAGATGAAATCACACCTCTTATCCAATTCCGGCACTAATCAATCTGATTGGGAAGGAGATGCAGCACTTGCCATTTCATCCCTAGCCTTTGTCTCGTATAGGACATTAGTTCAGTAA 1299 0.4303 MRYGGRRRRMLCGVVCAGDGFGVVDAGVETASAATRMAATMPMRPSEWGTRVRRAWERKRARQTTVEKMGKDFSTSVGIETLRVRRIIDGNNKLWSPLVAAPSKGPLSVAVEMCVGAVGYEKIITMSWPSEIKSNINNKGGANKACAACKFQRRRCTKDCILSPYFPSDKPTTFTNAHRLFGVCNMTRILSKIKPEQRDECMQSIIFESDMRAQFPVGGCLSIIHLYQDHLAKVNAELHNVQRWIAYFKQQEQYHLQQQQQQQQYLSLPLIMTPDQPYNERKDNCINIVALPSIGGGVNDNNVQKESSDEKLNSKLGALSMCQQFVDLKPSKDKLGECSTYSCQQVENQVYANQIDLDSDPKRLKFSPRNNTFDYKHKDGGHVKGFRTNCCNLQQMKSHLLSNSGTNQSDWEGDAALAISSLAFVSYRTLVQ 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02280 432 ProSiteProfiles LOB domain profile. 144 245 IPR004883 -
Adu10g02280 432 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 142 308 - -
Adu10g02280 432 Pfam Lateral organ boundaries (LOB) domain 145 242 IPR004883 -
Adu10g02280 432 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 142 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02280 Adu-Chr10 97325452 97330734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02280 144 267 AS2 family AT3G13850 45.312 5.09e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu10g02280 LOB 1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02280 - - ahf:112717910 490.73