Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02201 ATGGATGTGACTTCCTCTTCTGTCGCCGCCGCCACCGCCGCCGCCGCTCGCGTCGCACAAGCTCCTTCCACCGCTGCTCTCAATGCGGTTGCTCCTTTCGTCGTCACACGAGCTCTCTCGGTCGTGCTCTTGTCTTACGAGCTCCCTCCGCCGCCATTCTCGCGCTGCTTCTTCTCTCCTCGCCGGAGGGCTGGGAAGGGAAAACTTGTAGTTGTGGACTCCAATGATCAAACTAAGCTTAAACATGAGGATCAGAAGACTCTTCGTAGACTGGCTCAGAATTGTGAGGCTGCTAAGAAGAGTCGATTGAGGAAGAAGGCATATGTGCAGCAATTGGAGAATAGTAGAGTTAGGCTTGCACAATTAGAGCAAGAACTTCAGTCATCCAATTTCACGGTACATAGAAGGCCAAGAATGGGAGGCCATAGATTCATAGGAATGAGAACTCAACATCAAAAGCTGACTAGAAAATGTGATATTCGCGGCAACATTTTCTTGTGGGCATTTAAGGGAGTTATGGATCAGAACCCTTCCCCATTTGGGCACATTTTGCTTGATCAGAGTTTTAGCCCCAGCTGTATAATGCATCGAGATACTTACCTAAATAAGGTTCTCGTTGGGAGCGAGCAAGGTCCTATGCAGCTTTGGACCATTAGCACAAAGAAAAAGATATTTGAGTTTAAGGGATGGGATTCACCGATCACCTATTGTGTTTCTTCCCCTGCTCTAGATGTCGTTGCAGTTGGGTGTGCAGATGGAAGCATTCATGTTCATAACATTCGTTATGATAAAGAATTGGAAACCCTTCTAGCCTCTGGAGGTTCATCAGGTGTTATAAGCGTATGGAATCTGGAAAAGAAAAGGCTCCAGTCAGTTGTAAGAGAGGCTCATGATAGTGTGATCACATCACTACATTTTTTTGCAAATGAGCCAGTGCTTATGAGTTCTTCAGCAGATAATTCTATTAAGAATAATCTTCATGAACTCTGGACCCTTCTCAATTTTCTTCTGCCTGAAATTTTTAGCTCTGTTGAAACTTTTGATGAATGGTTCCAAATATCAGGTAAAATGGTTCTATTGGATAACAAGGCCATGGAGCAAGTGAGCAAGAACCAGGCATTAGTAGATGCTATTGGAGAACCAATAGTTAAAGCTCAAGATCGTGCTCATAGGATTGGACAGAAGAAATAA 1191 0.4458 MDVTSSSVAAATAAAARVAQAPSTAALNAVAPFVVTRALSVVLLSYELPPPPFSRCFFSPRRRAGKGKLVVVDSNDQTKLKHEDQKTLRRLAQNCEAAKKSRLRKKAYVQQLENSRVRLAQLEQELQSSNFTVHRRPRMGGHRFIGMRTQHQKLTRKCDIRGNIFLWAFKGVMDQNPSPFGHILLDQSFSPSCIMHRDTYLNKVLVGSEQGPMQLWTISTKKKIFEFKGWDSPITYCVSSPALDVVAVGCADGSIHVHNIRYDKELETLLASGGSSGVISVWNLEKKRLQSVVREAHDSVITSLHFFANEPVLMSSSADNSIKNNLHELWTLLNFLLPEIFSSVETFDEWFQISGKMVLLDNKAMEQVSKNQALVDAIGEPIVKAQDRAHRIGQKK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02201 396 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 89 104 IPR004827 GO:0003700|GO:0006355
Adu10g02201 396 Coils Coil 105 132 - -
Adu10g02201 396 Gene3D - 86 130 - -
Adu10g02201 396 SMART WD40_4 286 326 IPR001680 GO:0005515
Adu10g02201 396 SMART WD40_4 220 259 IPR001680 GO:0005515
Adu10g02201 396 SMART brlzneu 82 160 IPR004827 GO:0003700|GO:0006355
Adu10g02201 396 PANTHER WD REPEAT-CONTAINING PROTEIN 36 158 323 - -
Adu10g02201 396 Pfam SNF2-related domain 322 357 IPR000330 GO:0005524|GO:0140658
Adu10g02201 396 Pfam WD domain, G-beta repeat 295 323 IPR001680 GO:0005515
Adu10g02201 396 SUPERFAMILY Leucine zipper domain 86 130 IPR046347 GO:0003700|GO:0006355
Adu10g02201 396 Pfam bZIP transcription factor 85 126 IPR004827 GO:0003700|GO:0006355
Adu10g02201 396 Gene3D - 147 332 IPR015943 GO:0005515
Adu10g02201 396 SUPERFAMILY WD40 repeat-like 162 323 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02201 Adu-Chr10 95471689 95476164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02201 66 127 bZIP Transcription Factor Family AT1G68640 69.355 3.70e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu10g02201 bZIP_1 5e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02201 K14554 - adu:107469594 429.098