Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02194 ATGAATCTAACGACGATGATGATGGAAAGAAAGGAAGAAGGCATGATAATAGAAGAGAACAAGAAGAAGAGCAATGAAAATGACAAGTTTACCCTGAAGGGATCGGCGGCGGCGGCGGCGTCGTCATCAACAAGGCAATGGTCGGCGTTTCGGAATCCAAGAATCGTGAGGGTATCAAGGTCATTTGGGGGAAAAGACAGGCACAGCAAGGTTTGCACCATAAGAGGGCTTCGTGACCGTCGGATCAGGCTCTCAGTCCCCACCGCCATTCAATTGTACGACTTGCAAGACAAGTTGGGACTCTCTCAACCAAGCAAAGTCATCGATTGGCTTCTTGATGCTACTAAACTTGATATCGATAAGCTTCCCCCTCTTCACTTCCCTCAACCCTGCTTCCAACCGCCGCAAACCCTATTCCCTCATCTTCTCCATGACCCTTCCTCTTTCTGGAAACCCAGGTTCTGGGATTTCGACTCTTCCGCTTCCTCCTCTTCTTCTTCCAGGTTTCTCAAAGGGAAGGACTTAATGACCACCATGCCCTCCGATAATAATAATAATAAAGCCAAGTGGATCTTCAAACCAAACAATGCGGATCATGAGAATCAAGAATTCGGAGGCGGTTACACTACTCAGAGGCTTTTCCCAATGGAGACTACTACCAATAATAATAATCCCTTTCAGAGTTTGTTTTTCAACAACAACTCTACCCCTGAGGCTTCTAATTTGGGAAGCCATGGATTGTTGTTTCCTTCTAGTTCTTGTTCTTCTTCATCTACAAGTATTTATCATCACCATCATCAAGTGGGAGATTATTATGGTAGTTATCCAATGCAATTGAACCATTTATCTTCTTTGCAAGTAGGCCCATCTGCTTCCTCACAATTATTGTTTGGTCCTTTATCTTCTGCTACTGCTACACCGCAGATTTTCACACCTTATGCACCATTTGTAACAACCCCATCATCTCTTCTCGAAGGTAGTAGTCATAATAATAATGGCGGTGCAGATTCAATAAAACAACAGCAGCATCAATTCATCAATAGTCACATTCATCACTTCTTGAACTCATCCTCCTCATCCACATCATCATCATCATCATCATCATCATCATCAACAAGCCTTCTTCTCCATCACCATCATCATTCATTATTCAGTTCATCATCACCTGTCAGACCCTTCTTCCACTACTACTACTACTTCAGGTCGTTCTTGATCTTCAATTGCTGCTACTACTACTACTATAATTCAAGAATGAATGTAGACCAAATTTATATTCTGAGAAAGCTAAGAGATGATGAACACATGCACCGCACATTTGTAGTTCTTATTTGCTAA 1335 0.4247 MNLTTMMMERKEEGMIIEENKKKSNENDKFTLKGSAAAAASSSTRQWSAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLDATKLDIDKLPPLHFPQPCFQPPQTLFPHLLHDPSSFWKPRFWDFDSSASSSSSSRFLKGKDLMTTMPSDNNNNKAKWIFKPNNADHENQEFGGGYTTQRLFPMETTTNNNNPFQSLFFNNNSTPEASNLGSHGLLFPSSSCSSSSTSIYHHHHQVGDYYGSYPMQLNHLSSLQVGPSASSQLLFGPLSSATATPQIFTPYAPFVTTPSSLLEGSSHNNNGGADSIKQQQHQFINSHIHHFLNSSSSSTSSSSSSSSSSTSLLLHHHHHSLFSSSSPVRPFFHYYYYFRSFLIFNCCYYYYYNSRMNVDQIYILRKLRDDEHMHRTFVVLIC 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02194 444 Pfam TCP family transcription factor 64 127 IPR017887 -
Adu10g02194 444 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 7 378 IPR005333 GO:0003700
Adu10g02194 444 ProSiteProfiles TCP domain profile. 64 122 IPR017887 -
Adu10g02194 444 PANTHER TRANSCRIPTION FACTOR TCP17 7 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02194 Adu-Chr10 95136936 95138925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02194 12 380 TCP Transcription Factor Family AT5G60970 35.969 8.75e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu10g02194 TCP 3.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02194 - - adu:107470915 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03198 01 104057794 104059652 Adu10g02194 10 95136936 95138925 PCT