Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02183 ATGGAAAGCCATGGAGAAGGAAGTTCTGATTTCTCCGTCCAATGGACTGATGGATGGAGCACGGACTCAACAGATGATGATGAAGGAAGTGCTGCACGGTCACTAGAGACAGAGGAAGTTCAATCGGCAGCGGGGGATAGAGAAGATGGTTCAGTGGCTGGTGATGAGGGTTCCATGCCAGTACCAACTGGAATACACGTTGCGGCTGACACAGAATATGGTGACGAAGAATTGGGATCAGCGGTTTTAACTACCGCCGCATTGGAATCAGCTGAGTATAATAGTGTGGAAGAGGTATACAAAGCATATGTGGCTTTTGCGAAGGCAACTGGATTCGCTGTACGAAAGGGTGATTCTGTGAAAAATGAGGAAGGGAATATCGTGCGGAAGTTCTTTTATTGCAATCGACAAGGTTTGCGTGAGAAGAAGCACTATGAGAGGGTCGATAGGAAGAGGGCTCATAAAGCAGAGACAAGAACCAATTGTTATGCCAAatgtgagGGCATCAACTCATCATTAAAGAAATTTATAAAATCTGGAAATTGCCTGCTTGAGCTGGTAGAGAACCTCGATCGTGTTGTGAAAGATTACCGCAACAACGAGTTCATTGCGGATTACAAGTCATTGTATACTGATCCTGTGCTGACAACCGGATTGGAGTCTCTTGAGCGGTCGGCTAGTAAGTTGTACACAAGGGAAATATTCTTCGAGGTAAAGAAACAAATCGAGAGTGTTGGTGGGATGATTGTACTGCACAAGGATAGGTTTGGTAGCACTGAGAAGTTTATGCTAAGGAAGTTTAGAAAGCCACATCGTGTTCATGCGGTGCTGTATGATAGGGGTTCTGACAAgttcgagtgttcatgcaagttgtggaatactgtaggtattccttgtggtcacatattctgcgttctgaaagagctggacgtagaagagttgcctgatcgattggttctcaagaggtggcgtaaaaatgccaaatccgatagaattagcacaATAGAGGTCCAGTCAGATCCGGACCGGGCAATCCGCGTTAGGTACGGTGCGTTGTGGGCTGCTTGTTCGAAGATGTGCTTCCTGGGAGCTCAGGGTTCAGAAACCTACAAAGAAGTGGTCAATGTAGTCACGAAGACGTCTAACGAGTTAGAGTCCATGTGCTACATAGGCAACAAGGGTGGACAGGCACATCCTGCTGGAAATGACATTGACATTGGAAATCCTCATATCATAAGGTCAAAGGGTGCTTCTCGAGGCAGCACTCATGTGAAGAATGGGAGACGTTGCAGAAGGTGCTTTGGGTTCGGTCATGACCGCCGCAACTGTTTGGCAGATGAAGATAATGCGGACGAGGAATCAGTTTCCAGGTCGAGGAGAAGCCACAGCCGTGGCAGGAAAAGGGGCCGGGATACATAG 1419 0.4207 MESHGEGSSDFSVQWTDGWSTDSTDDDEGSAARSLETEEVQSAAGDREDGSVAGDEGSMPVPTGIHVAADTEYGDEELGSAVLTTAALESAEYNSVEEVYKAYVAFAKATGFAVRKGDSVKNEEGNIVRKFFYCNRQGLREKKHYERVDRKRAHKAETRTNCYAKCEGINSSLKKFIKSGNCLLELVENLDRVVKDYRNNEFIADYKSLYTDPVLTTGLESLERSASKLYTREIFFEVKKQIESVGGMIVLHKDRFGSTEKFMLRKFRKPHRVHAVLYDRGSDKFECSCKLWNTVGIPCGHIFCVLKELDVEELPDRLVLKRWRKNAKSDRISTIEVQSDPDRAIRVRYGALWAACSKMCFLGAQGSETYKEVVNVVTKTSNELESMCYIGNKGGQAHPAGNDIDIGNPHIIRSKGASRGSTHVKNGRRCRRCFGFGHDRRNCLADEDNADEESVSRSRRSHSRGRKRGRDT 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02183 472 PANTHER OS01G0607050 PROTEIN 143 387 - -
Adu10g02183 472 MobiDBLite consensus disorder prediction 1 20 - -
Adu10g02183 472 Pfam FAR1 DNA-binding domain 103 166 IPR004330 -
Adu10g02183 472 MobiDBLite consensus disorder prediction 26 53 - -
Adu10g02183 472 MobiDBLite consensus disorder prediction 447 472 - -
Adu10g02183 472 SMART 26again6 285 312 IPR006564 GO:0008270
Adu10g02183 472 MobiDBLite consensus disorder prediction 1 64 - -
Adu10g02183 472 ProSiteProfiles Zinc finger SWIM-type profile. 274 310 IPR007527 GO:0008270
Adu10g02183 472 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 143 387 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02183 Adu-Chr10 94973500 94976044 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu10g02183 FAR1 7.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02183 - - adu:107470907 544.273