Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02141 ATGGATTCGCAGGTGCATTTCACTGTTGGAGACGATGACTCGGGCGGTCTTAGTGAGGATGAGTATTTCCGCATTTCTTCTCCGATTGGGGATGACGAGGATGACTCCTTTGAGAGTGACTCCGAGACGGCTGAAACGGGTGACGAAACCCACGGGAACGGGGTCAGGCCAAGCCAGGAGATATGTGAGGCTGATGCTCCCGGTTTTAGGTCGACGGAGGATTTCTTGGACAAAGTGTTTAGTACCGAGGAAGATGCTTACGCGGCATACAAACAGTTTGCCAGACTCAGGGGGTTCGGTGTAAGGAAGGGTGACGTGGCTCGAATGAACGGCCTTTTGGTTAGACGAGACTTCTTTTGTCATCGTCAAGGTACAAGGCATGAGAAACACTACGATCGTCCCGAAAGAGTGAGGGAGGAGAAGCCGGAGAGTCGCACGGGTTGTTCAGCGAAGCTGAAAATTTACTATGACCTGCAAGATCAGGAGCCTGAATTTCGAAAGGTCTTCAAAAAGGCAGTTTATGCAAACTTCGATGCTACAGAGTTCGAGGAGTACTGGAGCACGGCGGTGGAAAGTTTAGGGTTAATGAACAACAGCTGGGTCAAAAGCACCTACGAATTAAGACATAGTTGGGCAACAGCATATCTACGTGGCACCTTTTGTGCGGGTTGCagaacgacttcgagggtggtaaaagactatcgcaacaatgaggttacagctCAATTCTATTCATCGTACTACACGCCCGTACTGACAACAGGTCTTGATAAAATCGAGTTGTTTGCTGCAAAGACATACACTAGAGCAGTCTTCAAGGAGGTTAGGAAACAGATAAAGGGGGTTGGTAGTTTATTGTTGCTGGGGAAAGACAACATTAGCACGACGTCCGTCTACAAGTTCTCAAGCGTGGGGAACCGTCGTAGGGTTCGCAAGGTTCTTTACGATCCAAGCGAACCAAAGATTGAATGTGATTGCATGCTGTGGAACAGTGAAGGCATTCCTTGCTGCCATATATTTTGCGTGATGAAGTATGAGGGTTGGGACGAAATCCCACCTGGTTTGATTGTTAGGCGTTGGTGTAAGGATGCGAAGGAATGGACAGAATCCGAAACATGCAATATATCGGGTCACAACAATTGTTTATTGAGGTACGGCACGCTGTGCAGTGCAATGAGTGTCGTGGCGAAACTAGCTTCTGACGATGTATTTGACTTCTTTTTAGTGAGGGATGCAGTAACGTCTTTGGCACGGAGGCTTCAGGTGCGTAGGGGCAATACCATAGACCACGAGGCCAGCGAGAGGCAACAGGACGTCGTGAGGGATCCGGCTGTCACCCGGACAAAAGGGGCCCCTAAACGCGGTAGGGAGACGGGGGATATGAGCCAGGTCGGCACTCGACAAGTGACCTCTGCCACGGTTGGGAATCCATCCTCCGGAGAGACTAGTGGGAATCGTTCGGGGCGTAGTTGCTCGGAGGCTGCACATCGCGTCTCTGAACCTAGTATTCCCAGCGCCACGGACCCATACATACCGAGACCGCCCGGACCCAATGCAGCCAAGTCTAGTCTACCCCGGTTAAACCTAGGGGTTGCCGGCGGCAACTTCTTCCTTGGGGGGCAGCAGATACATCAGTTCTTTGCGGCTCCCAGCTGTTCAACACTCCACGGATGCGGCCCTAATCAAGCAGATGCGGCGATTTCCTCACCTGAACCAGCTCCCGCTATGACTGCTACGAACTTTAATACGTCAGGTTCTGATGCCTTCCAACAGTGGGTTCTAGAGAATGCAATGGGAAACTCTTTGCCCGCCAACAGGTCCGGAGGGAACTTTTCATAG 1839 0.4981 MDSQVHFTVGDDDSGGLSEDEYFRISSPIGDDEDDSFESDSETAETGDETHGNGVRPSQEICEADAPGFRSTEDFLDKVFSTEEDAYAAYKQFARLRGFGVRKGDVARMNGLLVRRDFFCHRQGTRHEKHYDRPERVREEKPESRTGCSAKLKIYYDLQDQEPEFRKVFKKAVYANFDATEFEEYWSTAVESLGLMNNSWVKSTYELRHSWATAYLRGTFCAGCRTTSRVVKDYRNNEVTAQFYSSYYTPVLTTGLDKIELFAAKTYTRAVFKEVRKQIKGVGSLLLLGKDNISTTSVYKFSSVGNRRRVRKVLYDPSEPKIECDCMLWNSEGIPCCHIFCVMKYEGWDEIPPGLIVRRWCKDAKEWTESETCNISGHNNCLLRYGTLCSAMSVVAKLASDDVFDFFLVRDAVTSLARRLQVRRGNTIDHEASERQQDVVRDPAVTRTKGAPKRGRETGDMSQVGTRQVTSATVGNPSSGETSGNRSGRSCSEAAHRVSEPSIPSATDPYIPRPPGPNAAKSSLPRLNLGVAGGNFFLGGQQIHQFFAAPSCSTLHGCGPNQADAAISSPEPAPAMTATNFNTSGSDAFQQWVLENAMGNSLPANRSGGNFS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02141 612 MobiDBLite consensus disorder prediction 428 456 - -
Adu10g02141 612 Pfam FAR1 DNA-binding domain 90 156 IPR004330 -
Adu10g02141 612 SMART 26again6 322 349 IPR006564 GO:0008270
Adu10g02141 612 MobiDBLite consensus disorder prediction 461 492 - -
Adu10g02141 612 PANTHER OS03G0181600 PROTEIN 165 229 - -
Adu10g02141 612 PANTHER OS03G0181600 PROTEIN 77 154 - -
Adu10g02141 612 PANTHER OS03G0181600 PROTEIN 229 411 - -
Adu10g02141 612 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 165 229 IPR031052 GO:0006355
Adu10g02141 612 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 154 IPR031052 GO:0006355
Adu10g02141 612 MobiDBLite consensus disorder prediction 1 61 - -
Adu10g02141 612 MobiDBLite consensus disorder prediction 428 522 - -
Adu10g02141 612 ProSiteProfiles Zinc finger SWIM-type profile. 311 347 IPR007527 GO:0008270
Adu10g02141 612 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 229 411 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02141 Adu-Chr10 93773539 93776638 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu10g02141 FAR1 6e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02141 - - aip:107636207 555.058