Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02128 ATGTGGTTCAAAGCTACGGAATCTTGCAACTGTATAGAGCCGCAATGGCCTGCGGATGAATTACTGGTCAAATACCAATACATCTCAGATTTCTTCATCGCGCTTGCGTATTTCTCAATCCCTCTCGAACTCATCTACTTCGTTAAGAAATCAGCGGTTTTTCCGTACAGATGGGTTCTTGTGCAGTTCGGTGCCTTCATTGTTCTATGCGGAGCCACGCATCTTATTAACCTCTGGACCTTCACTGTTCACACGAGAACCGTCGCTATGACCAGAGAGCTATTTTTGAAGAACAAGGCTGCAGAACTTGATAGAGAAATGGGATTGATTCGTACTCAGGAGGAAACTGGTAGGCATGTTAGGATGTTAACTCATGAAATTAGAAGCACTTTGGATAGACACACAATCTTGAAGACTACGCTTATAGAGTTGGGAAGAACTTTGGCGCTTGAGGAGTGTGCTTTATGGATGCCAACACGAACAGGGTTGGAGCTTCAATTGGCTTATACGTTGCGGCAGCAGAATCCAGTTGGTTATACCGTGCCAATTCATCTGCCTGTGATTAATCAAGTGTTTAGTAGCAACCGGGCGGTGAAGATTTCGCCGAATTGCCCGGTTGCGAGGTTAAGGCCTCATACGGGGAAATACTTGCCAGGAGAAGTGGTTGCTGTTAGGGTACCTTTACTGAATCTGTCTAATTTCCAAATATATGATTGGCCGGAGGTTTCCACGAGAAGCTATGCTTTGATGGTGTTGATGCTTCCATCGGACAGTGCTAGACAATGGCATGTACATGAGCTAGAGTTGGTTGAGGTAGTTGCTGATCAGGTAGCTGTTGCTCTTTCACATGCTGCAATCTTAGAAGAATCAATGAGGGCAAGGAATCTGCTGATAGAGCAGAATGTTGCACTTGATCTAGCAAGAAGAGAAGCAGAAACTGCCATCCATGCTCGCAATGACTTTTTGGCAGTTATGAACCATGAGATGAGAACTCCCATGCATGCGATTATTGCACTCTCTTCTTTGTTACAGGAAACAGAGTTGACGGCTGAGCAACGTCTGATGGTAGAGACAATATTGAAAAGCAGCAATTTGTTGGCTACTCTCATCAATGATGTTTTGGATCTTTCACGGCTTGAAGATGGTAGTCTTCAACTTGAAACAACAACATTTAGCCTTCATTCTGTTTTTAGAGAGGTCCTTAACTTGATTAAGCCCGTTGCATCTGTCAAAAGATTGTCTCTCACTTTACATCTAGCTTCTGATTTGCCAGTATATGCCGTTGGCGATGAAAAACGTCTAATGCAAACTATTCTTAATGTTGTTGGTAATGCTGTGAAGTTCTCAAAAGAGGGCAGCATTTCCATCACTGCTATTGTTGCAAAGCCTGAATCCTTCAAGGATGCTAGAATTCCTGAGTTTCTTCCAGTGCCAAGATCAGGAATTAACCCACAAGATATTCCAAAGTTATTCACCAAGTTTGCACAAAGCCAAGCAGTACAGACTAAAGGTCCTGCTGGAAGTGGACTTGGCCTTGCCATTTGTAGGAGCAGGTTTGTAAATCTCATGGAAGGGCATATTTGGATTGAAAGTGAAGGTATTGGTAAAGGATGTACAGTCACTTTTATTGTGAAGCTTGGAATCCCTGACCGACCAAATGAATCTAAATTGGCGTTTGCTCCTAAAGTTCCTGGAAATCATGTATCTACAAACTTTGGAGGCCTCAAGGTTCTTGTCATGGATGATAATGGGGTTAACAGGTCAGTAACAAAGGGACTACTACTTCATTTAGGATGCGATGTTACAACTGCAGGCTCAAGTGAAGAGTGTCTGCGCATCATTTCGCCAGAACACAGAGTGGTCTTCATGGATGTGTGTACAGGGTTAGACGGATATGAACTAGCGATACGTATACAGGAGAAGTTTAAGAAACGCCAAGATAGGCCATTAATAGTTGCTCTTACTGGGAACACAAACAAGGTGACAAAAGAGAACTGTATGAGGGTCGGTATGGATGGCCTTATACTGAAACCTGTTTCTGTTGACAAAATGAGGGGTGTTTTGTCTGAACTCCTTGAGCACCGAGTTCTGTTTGAAGCTATTTAA 2106 0.4321 MWFKATESCNCIEPQWPADELLVKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFTVHTRTVAMTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLIELGRTLALEECALWMPTRTGLELQLAYTLRQQNPVGYTVPIHLPVINQVFSSNRAVKISPNCPVARLRPHTGKYLPGEVVAVRVPLLNLSNFQIYDWPEVSTRSYALMVLMLPSDSARQWHVHELELVEVVADQVAVALSHAAILEESMRARNLLIEQNVALDLARREAETAIHARNDFLAVMNHEMRTPMHAIIALSSLLQETELTAEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLETTTFSLHSVFREVLNLIKPVASVKRLSLTLHLASDLPVYAVGDEKRLMQTILNVVGNAVKFSKEGSISITAIVAKPESFKDARIPEFLPVPRSGINPQDIPKLFTKFAQSQAVQTKGPAGSGLGLAICRSRFVNLMEGHIWIESEGIGKGCTVTFIVKLGIPDRPNESKLAFAPKVPGNHVSTNFGGLKVLVMDDNGVNRSVTKGLLLHLGCDVTTAGSSEECLRIISPEHRVVFMDVCTGLDGYELAIRIQEKFKKRQDRPLIVALTGNTNKVTKENCMRVGMDGLILKPVSVDKMRGVLSELLEHRVLFEAI 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02128 701 ProSiteProfiles Response regulatory domain profile. 576 692 IPR001789 GO:0000160
Adu10g02128 701 CDD HisKA 315 378 IPR003661 GO:0000155|GO:0007165
Adu10g02128 701 SMART REC_2 575 688 IPR001789 GO:0000160
Adu10g02128 701 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 371 547 IPR036890 -
Adu10g02128 701 SMART HisKA_10 317 382 IPR003661 GO:0000155|GO:0007165
Adu10g02128 701 Pfam His Kinase A (phospho-acceptor) domain 318 382 IPR003661 GO:0000155|GO:0007165
Adu10g02128 701 SUPERFAMILY CheY-like 571 693 IPR011006 -
Adu10g02128 701 SMART HKATPase_4 429 548 IPR003594 -
Adu10g02128 701 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 303 383 IPR036097 GO:0000155|GO:0007165
Adu10g02128 701 Gene3D - 569 701 - -
Adu10g02128 701 ProSiteProfiles Histidine kinase domain profile. 324 548 IPR005467 -
Adu10g02128 701 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 91 698 - -
Adu10g02128 701 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 6 90 - -
Adu10g02128 701 PANTHER ETHYLENE RECEPTOR 1-LIKE 6 90 - -
Adu10g02128 701 PANTHER ETHYLENE RECEPTOR 1-LIKE 91 698 - -
Adu10g02128 701 Gene3D - 283 381 - -
Adu10g02128 701 Gene3D - 382 551 IPR036890 -
Adu10g02128 701 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 546 IPR003594 -
Adu10g02128 701 SMART gaf_1 132 291 IPR003018 GO:0005515
Adu10g02128 701 CDD REC_ETR-like 575 688 - -
Adu10g02128 701 PIRSF Ethylen_sen_hybr_HK 89 699 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Adu10g02128 701 PIRSF Ethylen_sen_hybr_HK 3 91 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Adu10g02128 701 Pfam GAF domain 132 281 IPR003018 GO:0005515
Adu10g02128 701 SUPERFAMILY GAF domain-like 135 284 - -
Adu10g02128 701 Pfam Response regulator receiver domain 577 685 IPR001789 GO:0000160
Adu10g02128 701 Gene3D - 110 282 IPR029016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02128 Adu-Chr10 93386532 93390610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02128 7 701 Miscellaneous Gene Families AT1G66340 75.067 0.0 1120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu10g02128 GAF 3.7e-14 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02128 K14509 - gmx:100795340 1212.59