Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02089 ATGCTCGGGGAAGAAATCGAGAGGGAGAAAACGACGGCGTTGGAGGTTGAAATCAGAAGAAATAACCATGCACAATTGGTGAGGAAAAGGAAAAACAAAAACGATGTCCTTTCAATGATGAAGGTGAAGAAGACAGAGGAGATAGAGAAGACACAAAAGAGTGAGAAGTTGATATTCTGCTACGGTGAGGCGCAGCCGATTCAGTTTGACAATAACATGAACCATGATCATTCCTATTTGAGCGGCGCCGCCATGCCAAGATTGGATGTTACTGAGGTTGGAAGTGAAGAAATGGATACTTGTTACGAGGAGATGCCGCTTTTGGATCTCTCCCAGGTTGGAAGTGAAGAGATGGATCCTGGTCACCAGGTACCGGATCATGATGGCCTTCGGGAAGATGAAATACCTTGTGTTGGAATGCGGTTTGATCAATTGCAAATGGCTCACGAATTCTATGTGACATACGCAAAGAAAGTCGGGTTTGCCACTAAGATACGGACGACAACCTGTGATAAGCTCACAAATCAACCCATTAACCAAGCTATTCACTGTAATAGGGATGGGTTCCGTGTGTCTCGTGTCAAAGCGTCAACGCGGAAGAATAGGATCTCAGCCGCTGGGTGTAAGGCAAGGATATACGTGAAGTTTGACaaggaggcgcatgattgggttttcttcaagGCATGGATTACCgtttgcgtccttcgtcggtgtcaaccaccatgCTCTGTTGTTGCTGAAGAGGGGCCAGGTGCATGCATGAAGGTTGAAGAGGAAATACCAGTGAATGAAGCTATTCTTTGCATTCCGTACGACGTCCACTTCGAACGATCCACGCAGGAGGTTCGTTGTGAGTGCAATCTATTTGAGAGTTCAGGAGTGTTATGCTGTCATTGTCTTGCAGTCTTCCATTATTACAAGGTGTATAAAGTACCTAATCGATATGTTCTCTCTCGTTGGAGTAAGAACATAAAGCGCAAGCATACTTATGTCAAGAGTAGTCACGATGTCAGCCGGTCGGATGAGAGTCATATTGCATTCAGGGGACTATGTGCACACTTCTACAATGTTGCTCAGGATTTTGTAAACGATGACGAAGAAACGGCCTTGCTTCATGCTGCTCTAGAAGAAACGAGAGCTAAGCTGACTGCTCACCGTGCCAAGAAGAGATCCGAGAGTGTGGCGGACTCCCACAACAATATTGGCTCGACAAGTTTGAATGTTTCCACAGTGATGGACATCCAAGCCCCATCGAAGGTCAACACAAAGGGCCGCCCAAAGAGTAAGAGGCTCGGCGCTGCCCTGGAGAAGTCAATTAAAAAATCTGCCCGGAAGAGAAACAAGCCTGACCCACCGGTGGTTTGTCCGAAGCCAACTCAAGATGTAAGATTCGGTGGTGTTGTAGGCCACGCTGATCCCGAACAAGTTGGTGGCTTCATGTCTTTGTTAAGCTCCTTTAACAAAAATTAA 1470 0.4435 MLGEEIEREKTTALEVEIRRNNHAQLVRKRKNKNDVLSMMKVKKTEEIEKTQKSEKLIFCYGEAQPIQFDNNMNHDHSYLSGAAMPRLDVTEVGSEEMDTCYEEMPLLDLSQVGSEEMDPGHQVPDHDGLREDEIPCVGMRFDQLQMAHEFYVTYAKKVGFATKIRTTTCDKLTNQPINQAIHCNRDGFRVSRVKASTRKNRISAAGCKARIYVKFDKEAHDWVFFKAWITVCVLRRCQPPCSVVAEEGPGACMKVEEEIPVNEAILCIPYDVHFERSTQEVRCECNLFESSGVLCCHCLAVFHYYKVYKVPNRYVLSRWSKNIKRKHTYVKSSHDVSRSDESHIAFRGLCAHFYNVAQDFVNDDEETALLHAALEETRAKLTAHRAKKRSESVADSHNNIGSTSLNVSTVMDIQAPSKVNTKGRPKSKRLGAALEKSIKKSARKRNKPDPPVVCPKPTQDVRFGGVVGHADPEQVGGFMSLLSSFNKN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02089 489 ProSiteProfiles Zinc finger SWIM-type profile. 271 307 IPR007527 GO:0008270
Adu10g02089 489 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 119 217 IPR031052 GO:0006355
Adu10g02089 489 Pfam FAR1 DNA-binding domain 150 223 IPR004330 -
Adu10g02089 489 MobiDBLite consensus disorder prediction 384 408 - -
Adu10g02089 489 PANTHER OS03G0843700 PROTEIN 119 217 - -
Adu10g02089 489 PANTHER OS03G0843700 PROTEIN 242 370 - -
Adu10g02089 489 SMART 26again6 282 309 IPR006564 GO:0008270
Adu10g02089 489 MobiDBLite consensus disorder prediction 439 461 - -
Adu10g02089 489 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 242 370 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02089 Adu-Chr10 92652579 92656956 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu10g02089 FAR1 1.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02089 - - aip:107615132 422.55