Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02062 ATGACTTCGCCATTTACTTTCTTTTGGGAAGCGTCATCTCCCCCATTGTTACAAGAAGAGGAGGCAGATTTGCAACATTATCTAACCCTCATGAGAGATCAAATAACAGATTACTTCATTCTCAAGGTACAAGTTACGCATCAAACTTGCTGGACTCATCATCAACAACCACAATCACATCCACCAGTGTTAGGAGCCATTTATTCGTTTGAATCCTCAATTCTAATCCAAGCGCAAGAATTCCTTCAAAACGGTTCATCACACATGCAAATGCACTTCCCTGAGGCTATTATACCAATTGCCTTGATTCATAACATGATGCCAGATATTATATCCTACGCGAAAGCCATAATTCAAACTCGTCCTTCCGGATTCCTCTATGAAAGACCTGATTTTCGTTTGTTCAGTTTGTATCTGGACATTATTATCCAGAATCCTATATTGTACGTTGATGACTTGAATATCCAGAATTTGTCATTGGAAGTTGATGACTACGGCAACATGATCACCGACTTAATCATTGAAGAGTCCATGGAAGATCCTAATAATATTAAGATGGTTCCTGCATCGAAGAATGCCATTGAGTCTCTTGAGAGAGTGAAGCTTGAAAATAATTACCATCTAGCAGAGAGGTGCAGTATTTGTCTAACTGAATTTGATTATGATGATGATACAGAACAAGTTTCATCAATGCCTTGTAAGCATGTATATCATCAAGAATGCCTCGTGCAATGGCTCAAGACTAGTCATTTATGTCCTTTATGTCGCGAGAAGGGAGATAGGGGATGGAGAGGTGTGGCACAAGGTGCTTTGCCAAAGGATGAGGAGCAGATGCTTCGTGTTTTGGCCTTCTGGTTCTGGactcgagctccgatcggcaacaaccttgccttgctgccgccggtggcggataccttgggaaacTCCGAGTCTCTGATCAGTGATCACCAACAACCTTTCTTCGAATGGTGCCGCCAAAACTGCACTTCTCGCTCAAACACCGCGTTCACCACCGCCGCCACGAACCTTCTCAACCATTCCACTTCCGCCGCCCACTCCTCCTAG 1065 0.4 MTSPFTFFWEASSPPLLQEEEADLQHYLTLMRDQITDYFILKVQVTHQTCWTHHQQPQSHPPVLGAIYSFESSILIQAQEFLQNGSSHMQMHFPEAIIPIALIHNMMPDIISYAKAIIQTRPSGFLYERPDFRLFSLYLDIIIQNPILYVDDLNIQNLSLEVDDYGNMITDLIIEESMEDPNNIKMVPASKNAIESLERVKLENNYHLAERCSICLTEFDYDDDTEQVSSMPCKHVYHQECLVQWLKTSHLCPLCREKGDRGWRGVAQGALPKDEEQMLRVLAFWFWTRAPIGNNLALLPPVADTLGNSESLISDHQQPFFEWCRQNCTSRSNTAFTTAATNLLNHSTSAAHSS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02062 354 Pfam Ring finger domain 211 256 IPR001841 -
Adu10g02062 354 SMART ring_2 212 255 IPR001841 -
Adu10g02062 354 ProSiteProfiles Zinc finger RING-type profile. 212 256 IPR001841 -
Adu10g02062 354 SMART ringv_2 211 256 IPR011016 GO:0008270
Adu10g02062 354 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 89 256 - -
Adu10g02062 354 PANTHER F6A14.12 PROTEIN-RELATED 89 256 - -
Adu10g02062 354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 260 IPR013083 -
Adu10g02062 354 SUPERFAMILY RING/U-box 194 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02062 Adu-Chr10 91733321 91735185 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02062 174 258 C3H Transcription Factor Family AT1G18760 41.176 6.48e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02062 - - adu:110276959 471.085