Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01988 GTTCTCTGTTGCAAATTGCCCACTGTTTATTCAGAAAACACAGTTATTGATTCCTTCCAATCTTAGTTACTCCTTTTCTGCTACAGAAACCAGAAAGTTGAAGACTTTTCAGCTCAAGGCTGGATTTTGGGAGTCAATTAAATCTGGGTTGATTAAGAACAACACTACACAAGTTGTTGATCCACCCAACGTAGATGAAGAAGATGAAGAACCTTTGCCTCAAGAGTTTGTCCTTGTTGAAAAGACTGAACCTGATGGAACAATTGAGCAAATAATATTTTCTTCAGGTGGAGATATTGATGTTTATGACCTTCAAGCTCTCTGTGACAAGGTAGGGTGGCCACGGAGGCCATTGTCGAAATTAGCTGCTGCTTTAAAAAATAGCTATATTGTAGCCTCATTGCATTCTGTAAGAAAGTCTCCAGGGTCAGAGGGGAATGAACAAAAGAGATTAATCGGCATGGCTCGTGCTACTTCAGACCATGCCTTCAATGCCACAATTTGGGATGTCCTAGTTGATCCTGGTTACCAGGGCCAAGGTCTTGGTAAAGCTCTTGTAGAGAAACTGATTCGAGCTCTTTTGCAAAGGGACATCGGCAATATAACTCTGTTTGCAGATAGTAAAGTTGTGGATTTCTACCGGAATTTAGGTTTTGAAGCTGACCCTGAAGGCATAAAAGGCATGTTTTGTACTATACAGCAGCAACAACAACAAAAGAATGGCAATAAGGAGAAAACACGTGAAGAAGAAGGAACGCGAAAAAGAAGGAGGAAAAGGAGGAGGAGGAGGAACGCGAAGAAGAAGACACTCCGCACAAAGGGAAACTTAACATTTGGTATGAGATTGCGCATCGCGATTGATTCGGCCAAAGGAATACTATATCTGCATACTGAGGCGAATCCTCCGATATTCCATCGAGATATCAAAGCATCAAACATACTCCTAGACTCCAAGATCATTGCTAAAGTAGCAGATTTTGGACTGTCGCGGCTTGCACCACACCTAGATGAAGGGAATGAACCTAAATATGTGTCAACAGTTGTGAAGGGAACACCAGGTTATCTAGATCCAGAGTACTTGTTAACTCATAAATTGACAGATAAGAGCGATGTCTATAGTCTTGGAGTTGTGTTTATGGAGCTTTTGACTGGCATGCAGCCACTATCACATGGAAAAAACATTGTTTGCGAGAGGGTGCTGTCGCCCCCAGAGGGACAAACTGTGGGTGTCGTCGTTGCTCGTGGAAGGTCTGCTCGCTTCTCCTCACCGTCCCTCTTCGAGCTCACTCTGTCTCTCTCGCTGGGATGTCTCTCTCTGATCAGCTGTGGAGTATTCGCCGCGCCGGCACCTTCCTTCCTCCCTCAATTCTCGCAACCTTGA 1381 0.441 FSVANCPLFIQKTQLLIPSNLSYSFSATETRKLKTFQLKAGFWESIKSGLIKNNTTQVVDPPNVDEEDEEPLPQEFVLVEKTEPDGTIEQIIFSSGGDIDVYDLQALCDKVGWPRRPLSKLAAALKNSYIVASLHSVRKSPGSEGNEQKRLIGMARATSDHAFNATIWDVLVDPGYQGQGLGKALVEKLIRALLQRDIGNITLFADSKVVDFYRNLGFEADPEGIKGMFCTIQQQQQQKNGNKEKTREEEGTRKRRRKRRRRRNAKKKTLRTKGNLTFGMRLRIAIDSAKGILYLHTEANPPIFHRDIKASNILLDSKIIAKVADFGLSRLAPHLDEGNEPKYVSTVVKGTPGYLDPEYLLTHKLTDKSDVYSLGVVFMELLTGMQPLSHGKNIVCERVLSPPEGQTVGVVVARGRSARFSSPSLFELTLSLSLGCLSLISCGVFAAPAPSFLPQFSQP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01988 459 MobiDBLite consensus disorder prediction 233 270 - -
Adu10g01988 459 Pfam Acetyltransferase (GNAT) family 101 218 IPR000182 GO:0016407
Adu10g01988 459 Gene3D - 95 232 - -
Adu10g01988 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Adu10g01988 459 MobiDBLite consensus disorder prediction 252 270 - -
Adu10g01988 459 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 100 223 IPR016181 -
Adu10g01988 459 SUPERFAMILY Protein kinase-like (PK-like) 271 393 IPR011009 -
Adu10g01988 459 PANTHER ACYL-COA N-ACYLTRANSFERASE 11 231 IPR045039 GO:0008080
Adu10g01988 459 ProSiteProfiles Protein kinase domain profile. 152 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g01988 459 PANTHER ACETYLTRANSFERASE NSI 11 231 - -
Adu10g01988 459 CDD NAT_SF 147 203 - -
Adu10g01988 459 SMART serkin_6 218 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g01988 459 Pfam Protein kinase domain 281 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g01988 459 Gene3D Transferase(Phosphotransferase) domain 1 263 415 - -
Adu10g01988 459 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 91 233 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01988 Adu-Chr10 89636336 89647633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01988 271 397 Receptor kinase-like Gene Family AT5G01950 77.344 3.72e-58 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Adu10g01988 Pkinase 1.2e-23 CL0016
TR GNAT Adu10g01988 Pkinase 1.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01988 K22450 - gmx:100799333 385.956