Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01978 ATGCCCAGAGTGATGATGTGGTTCAGGTTCTTGTTCTTGCTAATTCTTCTCAACTTGCTGAACTTATCACATGGCAAAGAAACTGAAAGTCAACAAGACCTTGAGCTTCTCTTATCGTTCAAAGCTTCAATCCACGACGATCCACTTCACTCTCTCAGTAACTGGCTCCCAACCATTTCTTTATGCAACTGGAACGGCATCACTTGCAACAAGAACATATCTGATGTCATAGTCGTCACCACCCTTTCCCTCGCCGGTAAAAACATCTCCGGCGAGGCTTCTTCCTCCGTTTTCCACCTTCCAAACCTCACATCACTCGACCTCTCCAACAACCAGCTTACGAAGCTCCTATACTTGGATCAACCTCCTCCATTTCTCTCCCCAATTCGTTACCTCAACCTCAGCAACAACAATCTAACCGGCCCTCCCCCTCGCTCCTTGTTCTCCGCCTCCTTTTCTCTCCTAGAGACTCTTGACCTCTCCAACAACATGTTCTCCGGCGAGATCCCTCCCCAAATTGGCCTCTTCTCATCCCTAACCTACCTTGACATTGGAGGCAACCTTCTCGGCGGACACATTCCGAGTTCCATAACTCAGTTGAAAAATCTACAGTACTTCACCCTCGCTTCGAACCAGTTAGTCGGCGAAATCCCGAAAGACATTCGAGCCATGAAGAATTTGAAGTGGATTTACTTCGGTTACAACAATCTCTCTGGTGAAATTCCCAGTGCCATTGGTGAGTTAACTTCATTGAACCACCTCGATCTTGTGTATAACAACCTCACCGGAGAGATTCCTGAATCCATCGGAAGCTTAACGAATCTCGAGTACATCTTCCTCTACCAGAACAAATTCAACGGTCCGATTCCTCGTTCAATCTTCAACCTCAAGAAGCTTGTATCTCTTGACCTCAGCGATAACTCTCTCTCCGGCGAGATTCCGGAACTCGTGATGAATCTTCAAAGGCTTGAGATTCTTCATTTGTTTTCGAACAATTTCTCAGGGAAGATTCCCAACGGTTTGGAATCTTTGCCGCGGCTTCAGGTGCTTCAGCTGTGGTCAAACTCGTTGACCGGGGAGATTCCGTCGGAACTTGGGAAGCGTAACAACCTAACGGTTTTGGATCTCTCTTCTAACAACCTCACGGGGAAGGTTCCAGAAACTCTGTGCAATTCCGGGACGCTTTACAAGCTCATCCTCTTCTCTAACAAATTAGAAGGCCGAATCCCGAGAAGCTTGAGCACATGCAAAACGCTGCGTAGAGTGCGTCTCCAGAATAACAAGCTCTCTGGGAATTTGCCTGAGGAATTCACCAACCTCACTCAGGTCTACTTCTTGGATATCTCCGGCAACCAACTTTCTGGAAGAATCGATGATAGACAATGGAGCATGCCATCTCTTCAAATGCTTAATCTGGCTAACAATTTCTTCTCCGGCGAGATTCCGAGCTCGTTCGGGAGCAAGAAATTGGAAGATTTAGACTTATCAGAGAATCGATTCGCTGGTGAAATTCCTCGTGGAATCTTCGGGAATTCGGAGGATTTGGTGCAGTTGAAGCTCGGAAACAACAATCTTTATGGTACTATTCCTGAAGAACTCTGTTCATGCAAGAAGCTTGTGGCGTTAGACCTTAGTCATAACAATCTCAACGGTCAAATTCCGATGAAGCTTGCGGAGATGCCAGTTTTAGGGCTTCTTGATTTGTCGGAGAACCAATTCTCCGGCGAGATTCCGCAGAATTTGGGGAAAGTGGAATCTCTTGTTCAGGTTAACGTATCTCACAACCGTTTCCATGGAAGTTTACCTTCCACAGGAGCGTTCCTCGCCATCAACGCTAGTGCAGTCGCAGGGAACGATCTTTGTGACCGCGAAAGTGAAGCTTCTAACGGTTTGCCACCATGCAAGGGTTCTCAGAACCAGACATGGCTGTTCTTAGTGCTATGTTTACTCTTTGGATTGGTTGCGATTGCCGTTGCAGCTTTTCTGGTAATTTTGGTGCGAAGAAGGAAAAGCATGCAGATGAGAAGAGTGGAGAATAACGAAGATGGCGGCACGTGGGAGATGCAGTTTTTCGATGCGAAAGCTTCGAGAACGATAAATATGGAAGACGTTGTTGCTTGTTCAAGAGAAGGGAAAGTGGTTTCGAAAGGAAGGAACTGGGTTTCGTACGAAGGAAAATGCATGGGAAGCGAAAACGACATGCGTTTTGTGGTGAAGGAAATCACTGATGCAACGACTCTTCCGCTTAGATTCTGGGAAGATACGGTGAAGTTTGAGAAGAAGGTTCGGCACGGTAACATTGTAAAGCTTGTTGCCACGTGTCACTCAGGGAAGAAGGGGTTCTTGGTTTACGAGAGTGTGGAGGGAGAGAGCAGTCTCGCCGAGATTGTGAGCGGTTTGAGTTGGCAACGGAGGTGGAAGGTTGCGGTGGGGATCGCGAAGGCGCTTAAGTTCTTGCATTGTGAGTGTTGCTCTACGGTCTGGGATCTCACCGACGAGGTGCTGTCGCCGGAGATTGTTTTGGTGGACGGAAAAGGTGTCACTCGCCTTAAGCTCAGCCCTCCTGGCATGGCGCCTTTGGATGTCAAGGGTTTCATGATCACTTCCCCTTACGTTGCACCAGAGGCAAGGAATAATAATAGTGGAGATGCTACAGAGAAGAGTGAAATATATGGATTCGGAGTTATGCTGATTGAATTATTGACTGGAAGAGCCACTACGGACATTGAATCAGGGAATGGAAATGTGGTGCACCAGCATCAGAGCGTTGTAGAGTGGGCCCGATACTGTTACTCTGACTGTCATCTTGACACGTGGATAGATCCCGTGATCAAGGGTGGAGATGAGTCAACCAAATATCATAACGACATCGTTGAGGCCATGAACCTTGCCTTGCACTGCACCGCCACTGATCCTAAGGCCAGACCAAGCGCAAGAGAAGTTCTTAAGGCTCTAGAAGCTATTCACACCACCAACACACAATTATTTTGCTCAACATGA 3000 0.4737 MPRVMMWFRFLFLLILLNLLNLSHGKETESQQDLELLLSFKASIHDDPLHSLSNWLPTISLCNWNGITCNKNISDVIVVTTLSLAGKNISGEASSSVFHLPNLTSLDLSNNQLTKLLYLDQPPPFLSPIRYLNLSNNNLTGPPPRSLFSASFSLLETLDLSNNMFSGEIPPQIGLFSSLTYLDIGGNLLGGHIPSSITQLKNLQYFTLASNQLVGEIPKDIRAMKNLKWIYFGYNNLSGEIPSAIGELTSLNHLDLVYNNLTGEIPESIGSLTNLEYIFLYQNKFNGPIPRSIFNLKKLVSLDLSDNSLSGEIPELVMNLQRLEILHLFSNNFSGKIPNGLESLPRLQVLQLWSNSLTGEIPSELGKRNNLTVLDLSSNNLTGKVPETLCNSGTLYKLILFSNKLEGRIPRSLSTCKTLRRVRLQNNKLSGNLPEEFTNLTQVYFLDISGNQLSGRIDDRQWSMPSLQMLNLANNFFSGEIPSSFGSKKLEDLDLSENRFAGEIPRGIFGNSEDLVQLKLGNNNLYGTIPEELCSCKKLVALDLSHNNLNGQIPMKLAEMPVLGLLDLSENQFSGEIPQNLGKVESLVQVNVSHNRFHGSLPSTGAFLAINASAVAGNDLCDRESEASNGLPPCKGSQNQTWLFLVLCLLFGLVAIAVAAFLVILVRRRKSMQMRRVENNEDGGTWEMQFFDAKASRTINMEDVVACSREGKVVSKGRNWVSYEGKCMGSENDMRFVVKEITDATTLPLRFWEDTVKFEKKVRHGNIVKLVATCHSGKKGFLVYESVEGESSLAEIVSGLSWQRRWKVAVGIAKALKFLHCECCSTVWDLTDEVLSPEIVLVDGKGVTRLKLSPPGMAPLDVKGFMITSPYVAPEARNNNSGDATEKSEIYGFGVMLIELLTGRATTDIESGNGNVVHQHQSVVEWARYCYSDCHLDTWIDPVIKGGDESTKYHNDIVEAMNLALHCTATDPKARPSAREVLKALEAIHTTNTQLFCST 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01978 999 Pfam Protein kinase domain 726 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g01978 999 Gene3D Phosphorylase Kinase; domain 1 699 785 - -
Adu10g01978 999 ProSiteProfiles Protein kinase domain profile. 708 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g01978 999 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 12 990 - -
Adu10g01978 999 SMART serkin_6 708 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g01978 999 Gene3D Ribonuclease Inhibitor 320 629 IPR032675 -
Adu10g01978 999 Pfam Leucine Rich Repeat 130 147 IPR001611 GO:0005515
Adu10g01978 999 SUPERFAMILY RNI-like 56 290 - -
Adu10g01978 999 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Adu10g01978 999 SMART LRR_sd22_2 272 298 - -
Adu10g01978 999 SMART LRR_sd22_2 100 121 - -
Adu10g01978 999 SMART LRR_sd22_2 176 205 - -
Adu10g01978 999 PRINTS Leucine-rich repeat signature 103 116 - -
Adu10g01978 999 PRINTS Leucine-rich repeat signature 296 309 - -
Adu10g01978 999 ProSiteProfiles Leucine-rich repeat profile. 102 123 IPR001611 GO:0005515
Adu10g01978 999 SUPERFAMILY Protein kinase-like (PK-like) 711 991 IPR011009 -
Adu10g01978 999 Gene3D Ribonuclease Inhibitor 253 319 IPR032675 -
Adu10g01978 999 Gene3D Transferase(Phosphotransferase) domain 1 790 997 - -
Adu10g01978 999 SMART LRR_typ_2 560 584 IPR003591 -
Adu10g01978 999 SMART LRR_typ_2 370 392 IPR003591 -
Adu10g01978 999 SMART LRR_typ_2 296 320 IPR003591 -
Adu10g01978 999 SMART LRR_typ_2 200 224 IPR003591 -
Adu10g01978 999 SMART LRR_typ_2 126 149 IPR003591 -
Adu10g01978 999 SMART LRR_typ_2 100 122 IPR003591 -
Adu10g01978 999 SMART LRR_typ_2 344 368 IPR003591 -
Adu10g01978 999 SMART LRR_typ_2 152 176 IPR003591 -
Adu10g01978 999 SMART LRR_typ_2 464 487 IPR003591 -
Adu10g01978 999 SMART LRR_typ_2 488 511 IPR003591 -
Adu10g01978 999 SMART LRR_typ_2 248 272 IPR003591 -
Adu10g01978 999 PANTHER - 12 990 - -
Adu10g01978 999 Pfam Leucine Rich repeat 99 114 IPR001611 GO:0005515
Adu10g01978 999 Pfam Leucine Rich repeat 249 264 IPR001611 GO:0005515
Adu10g01978 999 Pfam Leucine rich repeat 345 405 IPR001611 GO:0005515
Adu10g01978 999 Pfam Leucine rich repeat 489 549 IPR001611 GO:0005515
Adu10g01978 999 SUPERFAMILY RNI-like 241 599 - -
Adu10g01978 999 Gene3D Ribonuclease Inhibitor 30 252 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01978 Adu-Chr10 89199732 89203951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01978 33 986 Receptor kinase-like Gene Family AT2G25790 51.086 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Adu10g01978 Pkinase 2.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01978 - - adu:107470770 1945.63