Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01977 ATGATGAATGTTTTTAGCTACTTGCACTCAGCATTCTCCCCACCTATTGCCCATGGAAACTTGAAGGCTGCTAATGTTCTTTTGGATGAGAATTCGATGCCTTATCTTTCTGACGTTGGCGTGGCTGCTTTGAGACCATTGAGGAGCATTCAAGCTACCGAAGCTCCTATTGATATAGGTTACCTGTCACCTGACCATGGCAGAGCAGGAGGTAGCAGAAGAAAGAGATATGTGTGTGCCTTTGGGGTACTGCTTCTAGAAATGTTAATGAGAAGAAAAGCATTCGATAGGTATGCATGTTATGTTGAAGGTGGTAtcgtgttaagttga 330 0.4182 MMNVFSYLHSAFSPPIAHGNLKAANVLLDENSMPYLSDVGVAALRPLRSIQATEAPIDIGYLSPDHGRAGGSRRKRYVCAFGVLLLEMLMRRKAFDRYACYVEGGIVLS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01977 109 Pfam Protein kinase domain 3 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g01977 109 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g01977 109 PANTHER LEUCINE RICH REPEAT KINASE 2 5 98 - -
Adu10g01977 109 SUPERFAMILY Protein kinase-like (PK-like) 6 98 IPR011009 -
Adu10g01977 109 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 5 98 - -
Adu10g01977 109 Gene3D Transferase(Phosphotransferase) domain 1 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01977 Adu-Chr10 89142492 89142821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01977 5 96 Strubbelig Receptor Gene Family AT5G06820 52.577 2.18e-20 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Adu10g01977 Pkinase 3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01977 - - adu:110276950 220.705