Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01960 ATGGAAGAAGATGAATACATGTTATTAGAAAGCATGGCGGGGTGTTTTGGTTTTCTAGTTTTGTATATCTTGGTTAAACTTGTGCATAGCATATGGTGGAAACCAACAAGTACAGAGAAGTTATTGAAGAAGCAAGGGATTAAAGGGACTTGTTACAAACCTTTTAAGGGTGACATCCCAGACATGAATAAGTGTGCTCGCGAAGCAGCATCAAAGCCTATCAATCTCAACCACCAAATCGTCCCACGAGTCTTCCCTTTCTTTCACAAAATGGTTCGAAAATACGGAGAAGTTTCAGTATGCTGGTTTGGAAGAAAAGCAAGAGTGATAATAGTGGACGCAGAACTTACCCGGTTGATTTTGTCAAACAAGAACGGTCAGCTTACTAAGCCGCCGCGGGACCCCTTAATTAAGCTCCTAACCATGGGTTTGACTTCCCTCGAGGGAGAAAAATGGTCTCAACGCAGAAAAGCCGTTACATCTGCATTCCTCCTCGACAAGTTGAAGGCAATGCTTCCGGCATTTTCGTACAGTTGTTGTACCATGATTGAACGGTGGCAAAAATTCGTGGAACAAAACAATGGATCCTCTGAGTTGGATGTCACTTCTGAATTGGACATTCTCACGGGTGATGTTATTGCTCGAGCAGCCTTCGGTAGCAGCTACAAAGAAGGAAAGAGAATCTTCGACATACAAAAGGAGATTGCAATCTTGGTGCATGATGCCCTCACCAACATCTACATCCCTGGTTTCAGATTTATACCAACAAAGAAGAACAAGAAACGATACAAGTTAGATGTTCAAATCAAAGATATATTGATGGATATGATTAAGAAGAAAGAGCACGCAATGAAAGAAGATGAATCAGAAGGGCGGAGTAGTAATGATTTAATAAGCATTCTACTGGAATCAAGAGAAGTAGGAAATTCTCTAACAACAAAGGACGTGATTGAGGAATGCAAGTTGTTCTACTTTGCTGGCCAAGTCACCACAAAGAACCTGCTTGCGTGGACCATGGTAGTTTTATCTATACACCCTGATTGGCAAGAAAAAGCAAGACAAGAGGTATTAGATCTTTTCGGCAAAGAACAAATACCTCCCGATTTTGAAGCCATAAACCGCCTCAAGATAGTGTCGATGATATTGTTGGAAGTTTTGCGACTATATCCACCTGTACCAGTAGTTTCTCGGTACACAACGTGTGAAACGAAGGTAGGAAGCATGACAATTCCAGCAGGGGTGGATCTATATTTACCAGTGTTGCTTCTCCATCATGATGGGAGATATTGGGAGAATCCACAAGAGTTCAACCCAGAGAGGTTTAGCCAAGGGGTTTCAAAAGCTTCTAAGGATCAAAATGCTTTCTATCCATTCGGTTGGGGCCCAAGAATCTGCCCTGGCCAAAGTTTTGCCCACTTGGAATCAAAGATGGCTCTGGCTATGATTCTTCAACATTTCTCATTCCATCTTTCGCCTTCTTATTCTCATGCTCCATGTGCCCGTCTTACTCTTACGCCACAGTATGGGGCTCCCGTTATTGTTCAATGCATTTCAATTTAG 1560 0.4231 MEEDEYMLLESMAGCFGFLVLYILVKLVHSIWWKPTSTEKLLKKQGIKGTCYKPFKGDIPDMNKCAREAASKPINLNHQIVPRVFPFFHKMVRKYGEVSVCWFGRKARVIIVDAELTRLILSNKNGQLTKPPRDPLIKLLTMGLTSLEGEKWSQRRKAVTSAFLLDKLKAMLPAFSYSCCTMIERWQKFVEQNNGSSELDVTSELDILTGDVIARAAFGSSYKEGKRIFDIQKEIAILVHDALTNIYIPGFRFIPTKKNKKRYKLDVQIKDILMDMIKKKEHAMKEDESEGRSSNDLISILLESREVGNSLTTKDVIEECKLFYFAGQVTTKNLLAWTMVVLSIHPDWQEKARQEVLDLFGKEQIPPDFEAINRLKIVSMILLEVLRLYPPVPVVSRYTTCETKVGSMTIPAGVDLYLPVLLLHHDGRYWENPQEFNPERFSQGVSKASKDQNAFYPFGWGPRICPGQSFAHLESKMALAMILQHFSFHLSPSYSHAPCARLTLTPQYGAPVIVQCISI 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01960 519 Pfam Cytochrome P450 84 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 Gene3D Cytochrome P450 31 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 PANTHER CYTOCHROME P450 72A15-LIKE 7 515 - -
Adu10g01960 519 SUPERFAMILY Cytochrome P450 78 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Adu10g01960 519 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu10g01960 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01960 Adu-Chr10 88570235 88572387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01960 32 517 Cytochrome P450 AT3G14620 47.131 9.56e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01960 - - aip:107623710 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01960 10 88570235 88572387 Adu10g01960 10 88570235 88572387 ECH