Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01944 ATGACGACTCAACTCCTCAAGCTCAATCTCTACCCGAAATCCAACATCTCCTTCAACCACGCACCAAATCGTCATGTTCAGTTCCTTCCCCTTCTTCCCACTAATCACCGTCGCAATGACATTCACCGCAACTGCCACCGCCCGGGATTCCTCCGGCCACATTTCCTCGTATCTAACTCCTCGCGCACCGAGATTGCCTCGCCGGAGCCAGCTCAGCTAAAGACTACAGACTCCCCGCTCCTGCTCGACGTCTCCGGTATGATGTGCGGCGCCTGCGTCTCACGAGTCAAGAACATCCTCTCCGCCGATGACCGAGTTGACTCGGTCGTGGTCAACATGTTAACCGAGACCGCCGCCGTCAAGCTCAGGCGGCTCGACGAGGAGAAGGATGTGGAGGAGCCGGCGACGGTTGCGGAGAGCCTGGCCCGGAGGCTGACCGAGTGCGGTTTTCCGACGAAACGAAGGGCGTCGAGTTTGGGAGTTGCAGAGAACGTCAGGAAGTGGAAGGAGCTTGTGAAGAAGAAGGAGGAACTCGTCGCCAAAAGCCGCAGCCGTGTCGCTTTTGCTTGGGCTTTGGTGGCGCTGTGCTGTGGATCTCACGCTTCGCACGTTCTTCATTCTTTGGGGATTCACATTGGTCATGGATCGGTTTTGGAAATTCTTCACAATTCATATGTGAAAGGTGGTATAGCTCTGGGGGCTCTCTTGGGACCAGGACGAGAGTTACTCTTTGATGGCCTAAACGCATTTAGGAAGGGATCACCAAACATGAACTCTCTTGTGGGATTTGGTTCTATAGCTGCTTTTATCATCAGTTCGATATCACTACTGAACCCCGGGTTGGCCTGGGATGCAACATTCTTTGATGAGCCGGTCATGCTTCTTGGTTTTGTGCTTCTTGGACGTTCTTTGGAGGAAAAGGCAAGGATTCAGGCGTCTAGTGATATGAATGAACTCCTTTCATTGATATCTACTCAGTCAAGACTTGTGGTTACTTCATCGGAAGGTTCACCATCTACAGAGAGTGTGCTCGGTTCTAACACAATTTGCGTTGAAGTCCCAACTGATGATATCCGAGTAGGTGACTCAGTGTTGGTGTTGCCTGGAGAGACTATTCCTATAGATGGAAAGGTCATTTCAGGAAGAAGTGTTGTGGATGAATCCATGCTTACTGGAGAATCACTTCCTGTATTTAAAGAGGAAGGCCTCACAGTTTCTGCAGGAACTATAAATTGGGATGGACCTTTAAGGATTGAAGCTTCTTCATCTGGCTCCAACACAATGATATCCAAGATTGTACGCATGGTTGAGGATGCCCAGTCACGTGAAGCACCTGTACAGAGGCTTGCTGATTCCATAGCAGGGCCATTTGTATACAGCGTAATGACTATGTCAGCAGCAACATTTGCATTTTGGTACTATATTGGATCAAACATATTTCCTGATGTTTTGCTCAATGATATTGCGGGCCCAGAAGGGGATCCTTTGGACCATGGCTGA 1500 0.4987 MTTQLLKLNLYPKSNISFNHAPNRHVQFLPLLPTNHRRNDIHRNCHRPGFLRPHFLVSNSSRTEIASPEPAQLKTTDSPLLLDVSGMMCGACVSRVKNILSADDRVDSVVVNMLTETAAVKLRRLDEEKDVEEPATVAESLARRLTECGFPTKRRASSLGVAENVRKWKELVKKKEELVAKSRSRVAFAWALVALCCGSHASHVLHSLGIHIGHGSVLEILHNSYVKGGIALGALLGPGRELLFDGLNAFRKGSPNMNSLVGFGSIAAFIISSISLLNPGLAWDATFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVVTSSEGSPSTESVLGSNTICVEVPTDDIRVGDSVLVLPGETIPIDGKVISGRSVVDESMLTGESLPVFKEEGLTVSAGTINWDGPLRIEASSSGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVYSVMTMSAATFAFWYYIGSNIFPDVLLNDIAGPEGDPLDHG 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01944 499 ProSiteProfiles Heavy-metal-associated domain profile. 79 154 IPR006121 GO:0046872
Adu10g01944 499 Gene3D - 73 156 - -
Adu10g01944 499 CDD HMA 82 151 IPR006121 GO:0046872
Adu10g01944 499 PANTHER ATP7, ISOFORM B 77 476 - -
Adu10g01944 499 SUPERFAMILY HMA, heavy metal-associated domain 81 122 IPR036163 GO:0046872
Adu10g01944 499 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 347 483 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu10g01944 499 Gene3D - 308 440 - -
Adu10g01944 499 Pfam Heavy-metal-associated domain 82 150 IPR006121 GO:0046872
Adu10g01944 499 SUPERFAMILY Calcium ATPase, transduction domain A 347 436 IPR008250 -
Adu10g01944 499 Pfam E1-E2 ATPase 338 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01944 Adu-Chr10 88011680 88015688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01944 239 482 Primary Pumps ATPases AT5G44790 37.247 4.63e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01944 K17686 - gmx:100127402 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01944 10 88011680 88015688 Adu10g01944 10 88011680 88015688 ECH