Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01943 atgGTTGTCTCTTGCCCTTGTGCACTGGGTCTTGCCACACCTACAGCGATCCTGGTTGGCACCTCCCTTGGGGCAAGAAAAGGACTTCTTATTAGAGGGGGAGATGTGCTAGAACGCTTGGCCAGTATAAATTATATTGCCCTTGACAAGACCGGAACCCTCACCAAAGGAAAACCAGTTGTCTCCTTGGTTAGCTCTATTAATTATGGAGAATCAGAAATACTTCAGATTGCTGCTGCGGTGGAGAAAACAGCATCTCATCCAATTGCAAAGGCTATTATCAATAAAGCTGAGTCATTAGAGCTGGTCCTTCCAGTTACACAAGGGCAATTGGTAGAACCAGGCTTTGGAACATTGGCAGAAATAGATGGGCGTTTAGTTGCAGTTGGATCTTTAGAATGGGTCCATGATCGCTTCCAGATTAAAATGAACCCCTCTGATTTAGTGAATCTCGAACATACTTTGATGAATCATTCATCAGAGACATCTTCAAACTATTCAAAAACTGTTGTCTATGTTGGACGTGAGGGAGAAGGCATCATTGGTTCTATTACCATATCTGACGTTGTACGTGAAGATGCTCAATCTACCGTAGCAAGACTCAAGCAGAAGGGGATTGAAATGGTCCTGTTATCAGGAGACAGGGAAGAGGCAGTTGCAACTATAGCACAGACAGTTGGGATTGGAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTCTCTCTCTCTCTCTATGTATATATATATATATGTTGGCCTTACTCAAATATGGAATCATTGTTGGTGATGGGATAAATGATGCACCCTCTTTGGCTGTAGCTGATGTTGGGATTGCTCTACAAAATGAAGCTCAAGAGAACGCTGCCTCTGATGCTGCATCCATTATACTTCTTGGAAACAAAATTTCTCATGTTGTTGATGCACTAGACCTTGCACAGGCAACCATGGGAAAAGTGTACCAAAATTTATCTTGGGCGGTAGCCTACAACGTTGTTGCCATTCCCATTGCTGCTGGAGTTTTACTTCCCCAATTTGAATTTGCTATGACACCTTCACTATCAGGAGGGTTGATGGCTTTGAGCTCCATCTTCGTGGTTGGCAACTCGTTGCTTCTACAACTTCATGGGTCTCAGACCTCCAAAAAGGCCACATAA 1158 0.4361 MVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLASINYIALDKTGTLTKGKPVVSLVSSINYGESEILQIAAAVEKTASHPIAKAIINKAESLELVLPVTQGQLVEPGFGTLAEIDGRLVAVGSLEWVHDRFQIKMNPSDLVNLEHTLMNHSSETSSNYSKTVVYVGREGEGIIGSITISDVVREDAQSTVARLKQKGIEMVLLSGDREEAVATIAQTVGIGSSLSLSLSLSLILSLSLCIYIYMLALLKYGIIVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILLGNKISHVVDALDLAQATMGKVYQNLSWAVAYNVVAIPIAAGVLLPQFEFAMTPSLSGGLMALSSIFVVGNSLLLQLHGSQTSKKAT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01943 385 Pfam haloacid dehalogenase-like hydrolase 43 276 - -
Adu10g01943 385 SUPERFAMILY HAD-like 45 370 IPR036412 -
Adu10g01943 385 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1 228 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu10g01943 385 ProSitePatterns E1-E2 ATPases phosphorylation site. 49 55 IPR018303 -
Adu10g01943 385 Gene3D - 58 190 IPR023299 GO:0000166
Adu10g01943 385 PANTHER ATP7, ISOFORM B 1 375 - -
Adu10g01943 385 PRINTS P-type cation-transporting ATPase superfamily signature 47 61 - -
Adu10g01943 385 PRINTS P-type cation-transporting ATPase superfamily signature 204 214 - -
Adu10g01943 385 PRINTS P-type cation-transporting ATPase superfamily signature 262 281 - -
Adu10g01943 385 PRINTS P-type cation-transporting ATPase superfamily signature 182 193 - -
Adu10g01943 385 Gene3D - 38 313 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01943 Adu-Chr10 88006059 88010319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01943 1 374 Primary Pumps ATPases AT1G63440 36.554 4.60e-61 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01943 K17686 - gmx:100127402 572.778