Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01942 ATGGATAATCCTTACTTTGTTGTGCCGTACCATGATCCATATGATACTCCTCCACTGAGTCCGAGTTTTTTCAACATTTCCAACCCTACTCTTCTCGATCTTACCAATGTCTCCAGTGGAACCGAATCCAGGCACTCTCAACAAAAGAGTAATGGAATTCAAGAGGCTAATCTCCAACCAACTTTTGATCCGATGATTCAAGATAATAACTCTGTTGGAGGAACAGGAGGGAATAACTTCGAATCAATTCCTTTGTTACAAGTGCATTCTGAAGAAGGTCCGTCGCATGATTTCAACAACGATGTGAATACAATTACGCTGTCCCATTGGCCCCTACCACCAGTCCCGTTTTCTTGTAGCTGTTGTAGTATCCTCAGAGAAATTGTTCACACCAATGGATTTAACTTTACGAAAGTTGAGATTCATGGAAGGCCCGGCTTGATCTCTCATGCAATTCAACATCCTACTGTGAATGGGGATTTTGTTTCCACTGGCAACCTTCAATATCAAATGATCGAGAGAAGCATTGATGACGTGAAGAATTTCCTAGTTGAGTATTGCAGAGTACAAAGTGCAGCAGGGTACTTTATGTTGCAAGATCCACTATCTGCTTATTATGAGGCCCTATGCACTGGACTTGAATGGGTCGAAGAGTTCAGCGATGACACTGACGATTTGAATGCAAGCAATTCAGATGATGAGAATGAACAAGTGGCTGACAATGGAGTAGGAGCATCAGGAAAGGCTCCTAGAAGATTATCTCTTTCGGAACAGAGGGATAGAGCGGGGAAGATGAAATTGGACGATTTTGCCCCTTATTTTCATTTTCCAATTGAGGAAGCATCGAGGCAAATGAATATCTGCCCCACCGTTGTGAAGAAAATTTGCCGTAAGGAAGGATTATCACGATGGCCTTACAGGAAGATCAAAAGCACTGTAAGGCAGATCTCACAACTTAAGAGAACGATGGAATCAAAAGATGAAAGGTCAAAGGCAAGAATTCAGGCAGAGATTTACTGGCTCCATCTAAAATTAAGAGAGATTTGTGCTGGACGATACCCATCTGGAATAGTTATACCATGA 1083 0.4211 MDNPYFVVPYHDPYDTPPLSPSFFNISNPTLLDLTNVSSGTESRHSQQKSNGIQEANLQPTFDPMIQDNNSVGGTGGNNFESIPLLQVHSEEGPSHDFNNDVNTITLSHWPLPPVPFSCSCCSILREIVHTNGFNFTKVEIHGRPGLISHAIQHPTVNGDFVSTGNLQYQMIERSIDDVKNFLVEYCRVQSAAGYFMLQDPLSAYYEALCTGLEWVEEFSDDTDDLNASNSDDENEQVADNGVGASGKAPRRLSLSEQRDRAGKMKLDDFAPYFHFPIEEASRQMNICPTVVKKICRKEGLSRWPYRKIKSTVRQISQLKRTMESKDERSKARIQAEIYWLHLKLREICAGRYPSGIVIP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01942 360 PANTHER PROTEIN RKD4 2 350 IPR044607 GO:0003700
Adu10g01942 360 PANTHER RWP-RK DOMAIN PROTEIN 2 350 - -
Adu10g01942 360 Pfam RWP-RK domain 265 311 IPR003035 -
Adu10g01942 360 MobiDBLite consensus disorder prediction 224 260 - -
Adu10g01942 360 ProSiteProfiles RWP-RK domain profile. 245 332 IPR003035 -
Adu10g01942 360 Coils Coil 309 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01942 Adu-Chr10 88003864 88005307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01942 265 325 NLP Transcription Factor Family AT4G24020 45.902 9.46e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Adu10g01942 RWP-RK 6.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01942 - - adu:107470643 740.339