Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01895 ATGGCGCCAATCATGCAATCCTCTCAGCCTTGGGTCGAAAAATACCGACCAAAACAAGTGAAAGACGTAGCTCACCAAGACGAAGTTGTTCGTGTCCTCACCAACACTCTCGAAACTGGAAGCTGCCCCCACATGCTCTTCTATGGACCCCCCGGCACCGGAAAAACAACCACTGCTCTTGCAATAGCTCACCAGCTTTTCGGGCCTGAGCTTTACAAGTCTAGGGTGCTGGAGCTCAATGCAAGTGATGACCGTGGGATTAATGTTGTTCGCACCAAGATAAAGGATTTCGCAGCCGTCGCCGTTGGTACTACTCAGCGCAAGGGTGGTTATCCTTGTCCACCATATAAGATTATTGTCTTGGATGAGGCAGATTCAATGACTGAAGATGCTCAGGCATGTTTGCGTATTTACATTTATTTTTTTAATTTTCTAACTTTAATTAATGCCCTAAGGCGAACAATGGAAACTTACTCTAAAGTTACTCGGTTCTTTTTCATATGCAACTACATCAGCAGGATCATAGAACCACTGGCTTCAAGGTGTGCAAAATTCAGGTTCAAGCCATTGTCAGAAGAGATCATGAGCAACCGAATACTGTACATTTGCAATGAAGAAGGACTCAATCTTGATGCTAAGGCTCTTTCAACCCTGAGTTCTATCTCTCAAGGAGATCTTCGTCGGGCTATCACATACTTGCAGTCAGCGGCCCGATTATTTGGATCTTCCATTTCTTCAGAGGACCTGATTTCAGTATCTGGGGTTGTTCCAGCAGAGGTAGTGGAGGCAATTCTGAAAGCATGCAAAAGTGGAAATTTTGATTCAGCCAACAAGGAAGTAAACAATTTCATTGCAGAGGGATATCCAGCCTCTCAGATACTAACTCAGTTATTTGAGGCCATTCTTGAAGATGACATATCAGATGAACAGAAAGCAAGAATTGCCAAGAAGCTGGGAGAAGCAGATAAGTGTCTGGTTGATGGTGCTGATGAATACTTGCAGCTTCTTGACACAGTCAGCACTACAATGCAAGCTTTTTGTAACATGCCGGAAGGATTTGCTTATGGGAGTTAG 1074 0.4413 MAPIMQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTTQRKGGYPCPPYKIIVLDEADSMTEDAQACLRIYIYFFNFLTLINALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSNRILYICNEEGLNLDAKALSTLSSISQGDLRRAITYLQSAARLFGSSISSEDLISVSGVVPAEVVEAILKACKSGNFDSANKEVNNFIAEGYPASQILTQLFEAILEDDISDEQKARIAKKLGEADKCLVDGADEYLQLLDTVSTTMQAFCNMPEGFAYGS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01895 357 Gene3D - 192 255 - -
Adu10g01895 357 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 6 345 - -
Adu10g01895 357 SUPERFAMILY post-AAA+ oligomerization domain-like 256 340 IPR008921 GO:0003677|GO:0006260
Adu10g01895 357 PANTHER REPLICATION FACTOR C SUBUNIT 4 6 345 - -
Adu10g01895 357 Pfam Replication factor C C-terminal domain 257 340 IPR013748 -
Adu10g01895 357 CDD HLD_clamp_RFC 190 249 - -
Adu10g01895 357 CDD AAA 26 182 - -
Adu10g01895 357 SMART AAA_5 41 190 IPR003593 -
Adu10g01895 357 Pfam ATPase family associated with various cellular activities (AAA) 45 188 IPR003959 GO:0005524|GO:0016887
Adu10g01895 357 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 250 IPR027417 -
Adu10g01895 357 Gene3D - 256 344 - -
Adu10g01895 357 Gene3D - 2 189 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01895 Adu-Chr10 86259543 86263099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01895 1 353 Core DNA Replication Machinery Family AT1G21690 75.493 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01895 K10755 - gmx:100798331 602.053