Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01891 ATGGGGGATTCAAGGGTTGACACAATTGCACGCTTAGCTCAATGGAAAATCGATAACTTCGGACCTTGTTCCTACAAGAAATCTGACCCTTTCAAGGTCGGAATCTGGAATTGGTACTTATCCATAGAGAGAAACAGGTACCTCTACATACACCTGTTTCCAGAACCTTCTCGTGTCTCCAAGGAGCAGCCACCCGTTGCTCGTTTCATTCTTCGTGTTTCCAATGCTGGCTCTTCCCGCAGGTTCTATATTTCCCCTGTCCATGAAAGGATACTTAGGACATATGATGACTTTGTCTGGCCTGTTGATACTTCATTTGTTGGTCGCTTCATTATTGATGTTGAATTTCTTGACTTGAAGATATGCCCTCTGAATGGTGGGGAAGCTAGTTCTATATGGCCATCCGAGGGAAAATTGCAATCCATTGCATCTCAAAGTACTCTTAGTTGCCTCTCACGCATGCTTGACGATGCTATTCATGCTGACCTAACCATTATTACAGCTGATGGTACATTGAGAGCTCACAAGGCAATCTTGTCTGCAAGTTCGCCGGTGTTCCAGAGTATGTTTCATCACAACCTGAGGGAGAAAGAGTCATCTACTATCCATATAGAAGACATGTCGCTAGAATCTTGCACGGCTCTTCTAAGATACTTGTATGGAACAATCAAGCAAGACGATTTCTGGAAACACCGGCTTGCATTGCTTGGAGCAGCCAATAAATACGACATCACCGGTCTCAAAGACGTGTGCGAAGACAGTCTGCTGGAAGATCTTAACTCCGGAAATGTTCTCGAGAGGCTCAACGAAGCTTGGCTTTATCAATTACACAAGTTAAAGAAAGGATGCTTGACCTTCTTATTTGACTTCGGAAAGATATATGATGTTAGAGATGAAGTAAACAACTTTTTTCAGCATGCTGATAGGGAGCTAATGATGGAGATGTTTCAGGAAGTGCTCACAGTTTGGAGACCGGTATAA 981 0.4343 MGDSRVDTIARLAQWKIDNFGPCSYKKSDPFKVGIWNWYLSIERNRYLYIHLFPEPSRVSKEQPPVARFILRVSNAGSSRRFYISPVHERILRTYDDFVWPVDTSFVGRFIIDVEFLDLKICPLNGGEASSIWPSEGKLQSIASQSTLSCLSRMLDDAIHADLTIITADGTLRAHKAILSASSPVFQSMFHHNLREKESSTIHIEDMSLESCTALLRYLYGTIKQDDFWKHRLALLGAANKYDITGLKDVCEDSLLEDLNSGNVLERLNEAWLYQLHKLKKGCLTFLFDFGKIYDVRDEVNNFFQHADRELMMEMFQEVLTVWRPV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01891 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Adu10g01891 326 PANTHER OS08G0495500 PROTEIN-RELATED 2 326 IPR044714 -
Adu10g01891 326 CDD MATH 15 101 IPR002083 GO:0005515
Adu10g01891 326 Pfam BTB/POZ domain 155 257 IPR000210 GO:0005515
Adu10g01891 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Adu10g01891 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Adu10g01891 326 Gene3D Potassium Channel Kv1.1; Chain A 135 288 IPR011333 -
Adu10g01891 326 SUPERFAMILY POZ domain 144 257 IPR011333 -
Adu10g01891 326 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 2 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01891 Adu-Chr10 86198206 86200622 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Adu10g01891 BTB 2.3e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01891 K10523 - rcu:8278000 573.933