Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01876 ATGGGAATATATCTAAGCACACCCAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACCGTCTTAGATATGGTTTATCATCCATGCAAGGCTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATACTGATCTGGATGATTCTACTTCGTTTTTTGGTGTCTACGATGGGCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCAAAGTTTCTTCACCAACAGGTGCTCAGAAGTAAAGAATATGCAGATGGAGATATAGGAACCTCTCTTCAGAAAGCATTTCTAAGAATGGATGACATGATGCGTGGCCAAAGGGGATGGAGGGAATTATCAGTCTTGGGGGATAAGATAAACAAGTTTACTGGAATGATAGAAGGGTTGATTTGGTCTCCAAAAGGTACCGATGGTGGTGACCAAGTTGATGATTGGGCTTTTGAGGAGGGACCTCATGCTGATTTTGCTGGCCCAACTTCTGGAAGCACTGCCTGTGTTGCTGTTATTAGAAACAACCAACTTTTTGTTGCAAATGCTGGTGATTCGCGTTGTGTAATTTCTCGAAAGGGTCAGGCATACAATTTGTCTAGAGACCACAAACCTGAGCTTGAGATTGAAAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCACGCAGGACGAGTTAATGGAAGTTTAAATCTTGCAAGAGCTATTGGTGACATGGAATTTAAACAGAATAAATTTCTTCCCGCTGAAAAACAAATTGTAACTGCCAATCCAGATATAAACACTGTCGACCTTTGTGAAGAAGATGAATTCATGGTCCTAGCTTGTGATGGCATATGGGATTGCATGTCAAGCCAACAGTTGGTAGATTTTATTCATGAACAATTGCGCTCTGTAAGTTCTCACTTAGTTTTAACGTTTTCTTCAGCATTCAAATAA 924 0.4048 MGIYLSTPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYTDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLRSKEYADGDIGTSLQKAFLRMDDMMRGQRGWRELSVLGDKINKFTGMIEGLIWSPKGTDGGDQVDDWAFEEGPHADFAGPTSGSTACVAVIRNNQLFVANAGDSRCVISRKGQAYNLSRDHKPELEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINTVDLCEEDEFMVLACDGIWDCMSSQQLVDFIHEQLRSVSSHLVLTFSSAFK 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01876 307 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 291 - -
Adu10g01876 307 SUPERFAMILY PP2C-like 3 293 IPR036457 -
Adu10g01876 307 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Adu10g01876 307 ProSiteProfiles PPM-type phosphatase domain profile. 23 307 IPR001932 -
Adu10g01876 307 PANTHER PROTEIN PHOSPHATASE 2C 1 291 IPR015655 GO:0004722|GO:0006470
Adu10g01876 307 SMART PP2C_4 13 299 IPR001932 -
Adu10g01876 307 CDD PP2Cc 23 295 IPR001932 -
Adu10g01876 307 Gene3D - 1 304 IPR036457 -
Adu10g01876 307 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Adu10g01876 307 Pfam Protein phosphatase 2C 156 293 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01876 Adu-Chr10 85844183 85848867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01876 1 295 PP2C-type Phosphatase Gene Family AT4G31860 83.390 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01876 K17499 - gmx:100787778 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01876 10 85844183 85848867 Adu10g01876 10 85844183 85848867 ECH
Adu06g02913 06 106833283 106838042 Adu10g01876 10 85844183 85848867 PCT