Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01852 ATGGCAAAGTGTCACCGGAACAACGTCGGATCCGTCGTACTCGACCACCGCCACCCTGCCAAGAATGCTGCCACCGCCGGCCACTTCCGCTGGAACTCCATCTCCGCCTCCTCCATCCGCCGGATCGTTCTCGACGCCGTCAGCTGCGGCACCTCACGCTACGGTTACCATCAGCGCCACGACGACGACGACGAAGGATCCAGCTCCGCCGCAACTTCTACAGCGAGTCTGGCCTCCGGCAAGGAAGAGGCGCTGGTGGAGCTGAAGCAAGTGGTGAAGGACCTGCAGCAGGGAGAGGACTTGGCGAAGCGGCGCATGGCGGCGACGACGGTGAGGTCGCTTGCGAAGGAACGATCGGAAGTTAGGGGAACGCTCGCTATGCTTGGAGCTATTCCTCCGCTCGTCGGAATGCTCGATTCCGAAGACGTTCATTCTCAGATTGCTTCGCTCTATGCGTTGCTCAATCTCGGGATCGGCAACGATGCAAACAAAGCAGCCATCGTTAAAGTTGGTGCTGTTCACAAGATGTTGAAGTTAATTGAATCACCGGATGCTACTAATTCATCAGTTTCTGAAGCAATTGTTGCTAATTTCCTTGGATTGAGTGCTTTGGATTCAAATAAACCAATAATTGGATCCTCTGGTGCAATTCCATTCCTAGTTAGAACCCTTCAAGATTTGGATTACGAATGTAGCCACCAAGCCAAGCAAGATGCTCTTCGAGCTCTATACAATCTATCAATCTTTCCAACCAACAGTTCATTCATTTTGGAAACTGAGTTGGTCCCCTTTTTGGTTAGTTCAATTGGAGACATGGAAGTGAGTGAGAGAGTGCTTGCGATTCTAAGCAATCTGGTTCCAACTCCAGAGGGCAGGAAAGCTATCAGTGCTGTAAAGGATTCGATCTTCATTCTGGTGGATGTGTTGAATTGGACGGATTCGCCGGAGTGCCAAGAGAAGGCGTCATACATTTTGATGATTATGGCACACAAATCCTACAGCGACAGGCAGGTCATGATTGAGGCTGGGATTGGATCATCGCTGCTTGAATTGACCCTTCTTGGTTCCACATTGGCACAGAAAAGGGCCTCAAGGATCTTGGAATGTTTGAGGACAGACAAAGGGAAACAAGTTTCTAGAAGCTATGGTCGAGGAAGCTTGGGGGCCGATATCTCTGCGCCTATTTTCAGCGCGTCGCCATCTTTTACGAAGGCTTCAGGTGGAGGAGGTAAAGGCTATTTGGAGGAAGAGGAGGAGGAGGAAGATACGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTAGTCCAACAGAGTTTGCAAAACAACATGAGGAAAATTGTCAAGAGGGCCAACTTGCGTCAAGATTTTGTTCCATCCCAGCATTTGGCTTCACTTACTTCAAGTTCAACTTCTAAGAGCCTGCCATTTTAA 1431 0.4969 MAKCHRNNVGSVVLDHRHPAKNAATAGHFRWNSISASSIRRIVLDAVSCGTSRYGYHQRHDDDDEGSSSAATSTASLASGKEEALVELKQVVKDLQQGEDLAKRRMAATTVRSLAKERSEVRGTLAMLGAIPPLVGMLDSEDVHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPDATNSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQDLDYECSHQAKQDALRALYNLSIFPTNSSFILETELVPFLVSSIGDMEVSERVLAILSNLVPTPEGRKAISAVKDSIFILVDVLNWTDSPECQEKASYILMIMAHKSYSDRQVMIEAGIGSSLLELTLLGSTLAQKRASRILECLRTDKGKQVSRSYGRGSLGADISAPIFSASPSFTKASGGGGKGYLEEEEEEEDTMSEEKKAVKQLVQQSLQNNMRKIVKRANLRQDFVPSQHLASLTSSSTSKSLPF 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01852 476 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 476 - -
Adu10g01852 476 SUPERFAMILY ARM repeat 87 368 IPR016024 -
Adu10g01852 476 Coils Coil 414 437 - -
Adu10g01852 476 Gene3D - 57 387 IPR011989 -
Adu10g01852 476 MobiDBLite consensus disorder prediction 403 428 - -
Adu10g01852 476 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 476 - -
Adu10g01852 476 SMART arm_5 160 203 IPR000225 GO:0005515
Adu10g01852 476 SMART arm_5 118 158 IPR000225 GO:0005515
Adu10g01852 476 SMART arm_5 204 248 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01852 Adu-Chr10 84763554 84765617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01852 95 384 U-box Gene Family AT1G67530 30.303 2.13e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01852 - - gmx:100818576 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02886 06 106466445 106469295 Adu10g01852 10 84763554 84765617 PCT