Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01839 ATGACCATGGAGAATGGTGTTGATGATAGCAGTGATCAGTTCCCCAAAGGAATGCGTGTTCTTGCAGTTGATGATGACCCCACTTGCCTAATGGTTCTAGAAACTCTTCTCAGAAGATGTCAATATCATGTTACCACAACTAGCCAAGCAATAAAGGCATTGAAGCTGTTGAGAGAGAACAAGTTTGACCTTGTAATAAGTGATGTGCACATGCCAGACATGGATGGATTTAAGCTTCTTGAGCTTGTGGGACTGGAAATGGACCTACCTGTCATAATGTTGTCCGCAAATGCATCAGGAAATTCAGAACAAAATGGGAAGCTGAATAAGAAAAGGAAGGATCAGGATGATGAAGAAGATGAGGAGCAAGATAATGGCCATGACAATGAGGATCCTTCGGCCCAGAAGAAGCCTCGTGTTGTTTGGTCTGTGGAGCTTCACCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGACAAGGCTGTACCTAAGAAGATTCTTGATTTGATGAATGTTGACAAACTGACGAGGGAAAATGTGGCGAGCCATCTCCAGGCAATTTCTAAATATAGGCTTTATCTGAAACGAATCAGCTGTGTAGCGAACCAACAGGCGAATATGGTGGCGGCCCTAGGGAGTGCAGATCCATCCTACTTGAGAATGGGTTCTCTGAGTGGCGTTGGACATTTGCAAGCATTGAGTGGCTCGGGACAGTTTCCTAACAATGCTTTCAGGTCCTTTCCGCCGAATGGGATGGTTAGCAGACTGAACACTCCTGCTGGATTGAATGTGCATGGATTCCCTTCTTCAGGAGCATTTCACTTGGGTCAATCACAGAATCTAAACAGCTCAACTGTTGAGCAGCTGAAGTATCGGTCGTCCATTGTTCCTGTTAATCAGAATGGTGTTCATGGAATGCAGGTGCCTATGGGGCTTGATCCATTGCAACACAATAAGGGTGTTATTCCTGTTCAGAACTTGACCACTGGTATTGATGCTAAAACAAATTTTCCTGTCTCAAATAAACTCCCGGATCCACAATCAAGAGTAGCATCCGGCGCGCATCCCCCGCTTCTTGGTAGCTCAAACAATGCCTTGATGTTGGAAGCACGGCCACAAGACACACAAGGGGTTTTAGAATACGAAAACTTATCTTCTTCGGTACCTTCCCAACATTCAGAACTCCCATTCTCTTTGCTGGATCAAGGTAGATACAGTGATAATTGGTCTAGTGCTGTGCAATCATCTGGGATCCAGACCGGTTCTTACCCTTCAAGCGGAAGTTTTAGACAGACGGCAATACCTGCTACAGATAACATGGCTTCTTTACCCTTGCAAGAAGGGAATCTGAGTGTTTCTTCATCCATCTCTTTGCTGCCTAACCAGTCCTACAATTCGTTGATAGATACACACTCCCAAGCTGTGATTTTAGCTAATAGAACTGGTCATGTAAGCAATAGTGATGTGCCATTTCAAGGTTGGGATGATCGCAATGAAGATGCTAGCTACCATTCAAATGCTGTTTGTAACACAATAAACACTGTGGCCCCAGGTTCGAGTTCTGTTGGTCACACAACAATAAACTCAACCTTACACAGAAACTTGGAGTTTAATTATGGTGATAGCTTGCAAATGAAGCGCGATGCGATGACAAAGTTAGCGAAAGGGACCTCATTGAAACCGCATCAGGTGAATATCATGAACCAGCAGAAGTCTCAGCAGGGTAACTTCTCTAATAATGTTGGTTCCCTGGAAGACTTGGTCAGTTCAATGATGAAACAGGAGCAAGATGAGATGAAAATATTGGATGGAGGCTTCATTTGTGATAATTATTCTGGTGGCATATCAATGTGA 1857 0.44 MTMENGVDDSSDQFPKGMRVLAVDDDPTCLMVLETLLRRCQYHVTTTSQAIKALKLLRENKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANASGNSEQNGKLNKKRKDQDDEEDEEQDNGHDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVDKLTRENVASHLQAISKYRLYLKRISCVANQQANMVAALGSADPSYLRMGSLSGVGHLQALSGSGQFPNNAFRSFPPNGMVSRLNTPAGLNVHGFPSSGAFHLGQSQNLNSSTVEQLKYRSSIVPVNQNGVHGMQVPMGLDPLQHNKGVIPVQNLTTGIDAKTNFPVSNKLPDPQSRVASGAHPPLLGSSNNALMLEARPQDTQGVLEYENLSSSVPSQHSELPFSLLDQGRYSDNWSSAVQSSGIQTGSYPSSGSFRQTAIPATDNMASLPLQEGNLSVSSSISLLPNQSYNSLIDTHSQAVILANRTGHVSNSDVPFQGWDDRNEDASYHSNAVCNTINTVAPGSSSVGHTTINSTLHRNLEFNYGDSLQMKRDAMTKLAKGTSLKPHQVNIMNQQKSQQGNFSNNVGSLEDLVSSMMKQEQDEMKILDGGFICDNYSGGISM 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01839 618 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 100 593 - -
Adu10g01839 618 PANTHER TWO-COMPONENT RESPONSE REGULATOR 100 593 IPR045279 GO:0009736
Adu10g01839 618 PIRSF RR_ARR_type-B 97 616 IPR017053 GO:0003677|GO:0003700|GO:0009736
Adu10g01839 618 PIRSF RR_ARR_type-B 1 103 IPR017053 GO:0003677|GO:0003700|GO:0009736
Adu10g01839 618 ProSiteProfiles Response regulatory domain profile. 19 125 IPR001789 GO:0000160
Adu10g01839 618 SUPERFAMILY Homeodomain-like 135 197 IPR009057 -
Adu10g01839 618 SMART REC_2 18 124 IPR001789 GO:0000160
Adu10g01839 618 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 134 193 IPR017930 -
Adu10g01839 618 Pfam Response regulator receiver domain 20 99 IPR001789 GO:0000160
Adu10g01839 618 Gene3D - 18 107 - -
Adu10g01839 618 Gene3D - 133 199 - -
Adu10g01839 618 CDD REC_typeB_ARR-like 20 99 - -
Adu10g01839 618 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 98 IPR045279 GO:0009736
Adu10g01839 618 SUPERFAMILY CheY-like 16 100 IPR011006 -
Adu10g01839 618 MobiDBLite consensus disorder prediction 100 137 - -
Adu10g01839 618 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 1 98 - -
Adu10g01839 618 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 137 187 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01839 Adu-Chr10 84306893 84309684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01839 1 599 Response Regulator Gene Family AT2G25180 37.407 4.15e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu10g01839 Response_reg 5.1e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01839 - K14491 gmx:100809002 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01839 10 84306893 84309684 Adu10g01839 10 84306893 84309684 ECH
Adu06g02883 06 106419115 106422699 Adu10g01839 10 84306893 84309684 PCT