Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01835 ATGGATACACAACAACAACAACCTCATCATCATCGGTGTGATAAAATTGCAAGCAAGAAACCATGGCAGAGTTCACAAGAAGATCAAAAGGAGCATCAGCAAGAGCAAGTAGATACTACTTTGTTGGATCTGAATCTGAATGTCCATGATGATGATGAGTGCAGCACAGAGTTGAGCCTCATCACGTGTTTGGACATGGATAATTCCTCAAAAACTACTTCAATTGAAGACAACAACAACAACAACACATGTTGTGCAGGTTCTGATCAAAGAGTGTTCTCTTGCAACTACTGCCAGAGGAAATTCTACAGTTCACAAGCTCTTGGAGGACACCAAAATGCTCACAAGAGAGAGAGATCAATTGCAAAGAGAGCTCACTCCTTGATTCACAAACCTTCTTTTGTTCATCATCATCATCATATATCAAATGGCTTTGGAAGACCACCTCCCCTCATTGGAAGTAGTAGTGTTGGTAGATTCCAGGTGGCCAAGAACATGCTCAATTCTGCAGCAGATAATGAAGAAATCACAGCTTATCTTGTTACTAGGACTACTCAAGAAGACAATATAATGACCAAGAATAATAAGCACCTTGATTTATCTCTTAAACTCTAG 615 0.3984 MDTQQQQPHHHRCDKIASKKPWQSSQEDQKEHQQEQVDTTLLDLNLNVHDDDECSTELSLITCLDMDNSSKTTSIEDNNNNNTCCAGSDQRVFSCNYCQRKFYSSQALGGHQNAHKRERSIAKRAHSLIHKPSFVHHHHHISNGFGRPPPLIGSSSVGRFQVAKNMLNSAADNEEITAYLVTRTTQEDNIMTKNNKHLDLSLKL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01835 204 ProSitePatterns Zinc finger C2H2 type domain signature. 95 115 IPR013087 -
Adu10g01835 204 MobiDBLite consensus disorder prediction 1 36 - -
Adu10g01835 204 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 154 204 - -
Adu10g01835 204 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 154 204 IPR044246 GO:0009788
Adu10g01835 204 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 6 124 IPR044246 GO:0009788
Adu10g01835 204 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 124 - -
Adu10g01835 204 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 120 IPR013087 -
Adu10g01835 204 SUPERFAMILY beta-beta-alpha zinc fingers 89 121 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01835 Adu-Chr10 84122114 84122854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01835 24 156 C2H2 Transcription Factor Family AT5G10970 41.481 8.45e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01835 - - aip:107621568 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02880 06 106361043 106361973 Adu10g01835 10 84122114 84122854 PCT