Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01806 ATGAAGAACTTGTCCTTCACTTTCTCTATGCCAAGGCTTCTCTTTTGCCATGCCATCCCAACATCATCCCTGATCTTGATGTCTCTCTCGCTCATCCTTCCCAACTCAACGTGTAAATATTTGGCAGGTAAAGCGTTGTCAAGCGGAAATCAATACTATTTCTTCAGCAAAGTGAAGGAAAAAAGAATAACAGAAAATGGGTATTGGAAGGAAATAGGTGAAAGTGAAGCAATATTGTCATCAACGTTTGAGAAGAAAGTAGGGACAAAGAAGAACCTTGTATTCCACATAGGAGAAGCTCCACACGGCATTGAAACCAGTTGGGTCATGCAAGAATATCATATTTGCCCATCCTCTAACATTATTTCTACAACTAGAGCCAGAAGAAAACACGATCATCAAATTTGGAGCAAATGGGTTTTGTGCAAAGTGTATGAAAAGAAGGGGTCCGTACGAGGTGTAAACTACTGTAGCGACGATGATGACAGTGGGACAGAGCTATCTTGGCTTGACGAAATTTATCTCTCGTTGGATGATGATCTGGAAGAAATTAGCGTCTCCATTTTAGATTGA 573 0.4066 MKNLSFTFSMPRLLFCHAIPTSSLILMSLSLILPNSTCKYLAGKALSSGNQYYFFSKVKEKRITENGYWKEIGESEAILSSTFEKKVGTKKNLVFHIGEAPHGIETSWVMQEYHICPSSNIISTTRARRKHDHQIWSKWVLCKVYEKKGSVRGVNYCSDDDDSGTELSWLDEIYLSLDDDLEEISVSILD 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01806 190 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 40 185 - -
Adu10g01806 190 Pfam No apical meristem (NAM) protein 42 115 IPR003441 GO:0003677|GO:0006355
Adu10g01806 190 SUPERFAMILY NAC domain 41 147 IPR036093 GO:0003677|GO:0006355
Adu10g01806 190 ProSiteProfiles NAC domain profile. 1 147 IPR003441 GO:0003677|GO:0006355
Adu10g01806 190 Gene3D NAC domain 22 151 IPR036093 GO:0003677|GO:0006355
Adu10g01806 190 PANTHER NAC TRANSCRIPTION FACTOR 56 40 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01806 Adu-Chr10 83023509 83024478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01806 41 161 NAC Transcription Factor Family AT3G15510 31.818 4.61e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu10g01806 NAM 7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01806 - - adu:107470472 313.923