Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01796 ATGGTGCAACTAGCTCTACCCACCCGTGAAGCATCGGGCCTTCACCCTGAAGAGGATGACACCATAATCAGAGTTCACGCTCGGTTCGGCAACAAGTGGGCCACCATAGCCCAACTCCTTTCCGGCAGAACCAACAATGCCATTAAGAATCACTGGAACTCCACCCTCAAACGCAAGTGCGCCTCCATGGGTTTCATCGACGATCCTCACTTCGTGCAGCCACTCAAACGCTACGCTCCGTCAGCACCAGCGTCGTCGTACCCATGTCAACGGTGGTGGTGA 282 0.5532 MVQLALPTREASGLHPEEDDTIIRVHARFGNKWATIAQLLSGRTNNAIKNHWNSTLKRKCASMGFIDDPHFVQPLKRYAPSAPASSYPCQRWW 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01796 93 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 60 IPR017930 -
Adu10g01796 93 PANTHER MYB PROTEIN-RELATED 7 86 - -
Adu10g01796 93 CDD SANT 16 56 IPR001005 -
Adu10g01796 93 ProSiteProfiles Myb-like domain profile. 17 56 IPR001005 -
Adu10g01796 93 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 7 86 - -
Adu10g01796 93 Pfam Myb-like DNA-binding domain 16 55 IPR001005 -
Adu10g01796 93 Gene3D - 15 71 - -
Adu10g01796 93 SUPERFAMILY Homeodomain-like 16 61 IPR009057 -
Adu10g01796 93 SMART sant 10 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01796 Adu-Chr10 82812296 82812577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01796 7 61 MYB Transcription Factor Family AT2G23290 76.364 4.82e-24 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu10g01796 Myb_DNA-binding 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01796 K09422 - aip:107615096 122.094