Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01785 ATGGCCGCAATGAAGTCAATTCCAGGGTACCGGTTTCATCCAACCGATGTTGAGCTGGTTCAGTACTTTCTGAAAAGGAAGGTGATGGGGAAGAGATTCCCTTGTGATGTGATTGCTGAACTTGATATATACAAATATCCGCCGTGGGATCTACCAGATCATTCTTTGCTTAAAACTGGAGATTTGGAATGGTACTTCTTTTGCCCTCGAGGGAAGAAGTATTCGAGCGGAGGGAGGATGAATAGGGCCACAGAATGTGGGTACTGGAAGACTACTGGCAAAGATAGATCCGTTGAGAACAAGAAGCTTGTTGTGGGCATGATAAAGACTCTGGTGTTTCACATGGGTAAAGCACCCAAGGGAGATCGAACTGATTGGGTTTTGCATGAATACCGACTTCAAGATAAGGACCTTGCTGATAAGGGTGTTCAACAGGATTCTTATGTGATATGTAAAGTGTTTCAAAAGGATGGTCCTGGTCCTAGGAATGGTGCACAATATGGAAGGCCGTTTAATGAGGAAGACTGGGATAAAGAGGATGAAATTGACTGTGTAGAATCTGCACCTGTTGCTGCTCTACCTGCTGCAGTTCCTATACAACCCGCTTCATGTCATAGCTCTGTTGTGAATAACGTGAATCTCTCTGTGAGTGAATGCTATGGGTTGACCTCTGTTTCGTGTTTAACAGGGCCAATGCCTTCTTGCTCAGCACATCCTTCAGCTCCAAGTAATCAAGTTGATGGTGACATTACACCAGTGCCTGGTTCCTCCATAGAAGATAACATAATGGCTCCTACTCAGAACACCACAACTGAAAAGGTTGACAATCCTCCTGACATAAACAATGCTGAAGGAACACCTTGCTTTGATCCCAATGAGATTTTTGGGGGTCTGGGTGACCTTGATGGTTTGTTCGAAATGGGTGGAATTGGACATGGTTTTTCCTGCGGCCAAAATGGTGGATATACTGTGAATGAAATGCTTTCTGCGGGTGATGGGTTGCGTTTCCCTGATCCCCTGGACTACTTGGAGTTGGGTGACCTCGACACTCCATTGTTATGGGAGACTAATGAACAAGGAAATTGGAGCCAGGACAATAAGTGA 1104 0.4511 MAAMKSIPGYRFHPTDVELVQYFLKRKVMGKRFPCDVIAELDIYKYPPWDLPDHSLLKTGDLEWYFFCPRGKKYSSGGRMNRATECGYWKTTGKDRSVENKKLVVGMIKTLVFHMGKAPKGDRTDWVLHEYRLQDKDLADKGVQQDSYVICKVFQKDGPGPRNGAQYGRPFNEEDWDKEDEIDCVESAPVAALPAAVPIQPASCHSSVVNNVNLSVSECYGLTSVSCLTGPMPSCSAHPSAPSNQVDGDITPVPGSSIEDNIMAPTQNTTTEKVDNPPDINNAEGTPCFDPNEIFGGLGDLDGLFEMGGIGHGFSCGQNGGYTVNEMLSAGDGLRFPDPLDYLELGDLDTPLLWETNEQGNWSQDNK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01785 367 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Adu10g01785 367 PANTHER PLANT NAC DOMAIN PROTEIN 1 241 - -
Adu10g01785 367 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 241 - -
Adu10g01785 367 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Adu10g01785 367 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Adu10g01785 367 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01785 Adu-Chr10 82315980 82317998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01785 1 359 NAC Transcription Factor Family AT5G09330 42.162 4.86e-92 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu10g01785 NAM 6.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01785 - - adu:107470479 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03044 03 114144993 114147759 Adu10g01785 10 82315980 82317998 PCT