Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01745 ATGGAGAATTATGATCATTGTTCTTTATTTCTAGACCCTTCACAAACACTGCCTCATGTCTCAAATTGTAATTCTCTTCATCATCAATTTGGTGATGAGTTTCATTCATGGCTGGCACCGGTCGAAACGGTGGCCGGAGACAGAGCTGCTAGTGCTTCCAAGAGCCACAGTCAGGCCGAGAAGCGGCGTAGGGACCGGATCAATGCACAGCTTACAAGTCTAAGGAAACTAATTCCAAAATCTGATAAGCATGCAAATCCAGAGGCAGAAGTAATAGCTCTATCGCCAAACTCGCTCATGGCGAAGAATCATTTCGTGTGCGAGATATGCAAGAAAGGAGGGACCAGAACCTGCAGTTGCACCGGCGAGGCACAACCTGCCGTGGAAGCTTCGGGTTGA 399 0.4787 MENYDHCSLFLDPSQTLPHVSNCNSLHHQFGDEFHSWLAPVETVAGDRAASASKSHSQAEKRRRDRINAQLTSLRKLIPKSDKHANPEAEVIALSPNSLMAKNHFVCEICKKGGTRTCSCTGEAQPAVEASG 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01745 132 MobiDBLite consensus disorder prediction 54 70 - -
Adu10g01745 132 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 94 IPR036638 GO:0046983
Adu10g01745 132 Gene3D - 44 103 IPR036638 GO:0046983
Adu10g01745 132 Pfam Helix-loop-helix DNA-binding domain 54 85 IPR011598 GO:0046983
Adu10g01745 132 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 51 102 IPR011598 GO:0046983
Adu10g01745 132 MobiDBLite consensus disorder prediction 45 73 - -
Adu10g01745 132 PANTHER TRANSCRIPTION FACTOR BHLH30 28 83 IPR045847 GO:0003700|GO:0006355
Adu10g01745 132 PANTHER TRANSCRIPTION FACTOR BHLH51 28 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01745 Adu-Chr10 80543635 80545628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01745 30 83 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 53.571 1.67e-10 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu10g01745 HLH 4.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01745 - - adu:107469423 164.851