Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01727 ATGGATTTGGATGATTTCCGATCCATATTGGATACTGCCGGCGTTGACGTTTGGCTCTTCATCGACACCGCCATCACCGTCGCTTCCTTGGATTGCGGTGATGAGCTGAGGCGACGGAGGGATGGAATCATAGAACGAATCTTCGCTGCCACCACACCTCCTCTGCCGTGCCGGAACTGCGACGGCGATCGTAACCTGAGGTCCAATGGCTACCAAATCAAGAAACGCCTCAGCCCTAGCCCTAGCCCTCAGCGACAACACAGCCACCACCAGCAACGTCGTGGTGGCCGTGGTGCCGCCGCTGCAGTTTCTCCCTCAACGCCGCAGTCTCTCGGAGATGATGATGACAACGGCCACGCCGACGCCGCCGAAGACGACCGTGAAGATTTGGATCCTTACGGCGGCTTGTTCGATGATGAGCAGAAGAAGATTCTAGAGATTAAAGAGCAGCTCGAAGAACCCGACCAGTCTGAAGAATCGTTGGTGGAGCTGCTGCAAAATCTCGCAGACATGGATATTACATTCCAAGCGTTAAAGGAGACTGACATTGGGAGGCACGTGAATCGGTTGCGAAAGCATTCCTCCAATGACGTTCGCAGATTGGTGAAGCTACTTGTGAGGAAGTGGAAGGAAATTGTGGATGAGTGGGTGAGGTTGAATCAACCGGGTGGAACAGCTTCTCTCATGGCTGATGGGGACTCTCCACCGCTGAAAACCACCCAAAACGGGCATCATCAGATTCCTGATTTTGCATACTCGCCAAATCCACACAGTGAATGGAAGTTCTGGGTCTGA 795 0.5333 MDLDDFRSILDTAGVDVWLFIDTAITVASLDCGDELRRRRDGIIERIFAATTPPLPCRNCDGDRNLRSNGYQIKKRLSPSPSPQRQHSHHQQRRGGRGAAAAVSPSTPQSLGDDDDNGHADAAEDDREDLDPYGGLFDDEQKKILEIKEQLEEPDQSEESLVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKLLVRKWKEIVDEWVRLNQPGGTASLMADGDSPPLKTTQNGHHQIPDFAYSPNPHSEWKFWV 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01727 264 SMART TFS2_5 144 215 IPR003617 GO:0005634
Adu10g01727 264 MobiDBLite consensus disorder prediction 73 135 - -
Adu10g01727 264 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 258 IPR044790 -
Adu10g01727 264 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 138 223 IPR035441 -
Adu10g01727 264 Pfam TFIIS helical bundle-like domain 164 213 IPR017923 -
Adu10g01727 264 ProSiteProfiles TFIIS N-terminal domain profile. 139 216 IPR017923 -
Adu10g01727 264 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 141 222 IPR035441 -
Adu10g01727 264 CDD TFIIS_I 141 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01727 Adu-Chr10 79540444 79544388 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Adu10g01727 Med26 2.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01727 - - aip:107622503 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01727 10 79540444 79544388 Adu10g01727 10 79540444 79544388 ECH
Adu10g01727 10 79540444 79544388 Adu03g03095 03 115387457 115397064 ECH
Adu03g03095 03 115387457 115397064 Adu10g01727 10 79540444 79544388 PCT