Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01703 ATGTGTATTGCAAAGGTGGCGAATCCTCAAGAGAAAGGAAACAAGGTTGTTGAGAAGAGGGAATTGGAAGTTGATGAGAGGATAAACAACAACAATTCTACGTTGTCATCATCAATGCATATGATATTCCCAGGTTTGAATAGGGAGGAGGAGATGTCTGCCATGGTTTCGGCTTTGACCCATGTTGTCTCTGGTGAAGTTCCAACCAGTGCAGGTGACGATTATTCACTTCCAACAAGTAACATGACTTATGGTTCTTCAACATTTTCTAATTATGTTGTTGGAAGCGGCTCTTCTTCTATCAAGAGAACTAGGCAGCAAGATGATATATCCTTTGTTGACCACTTCTCTTCATCACATGGTGTAACTTCTTCATCCCCTACTACTATTCATACAACAATGAATAGAGAATGTTCAAGAGAAAGTGGAAGTGGGAGTGGAGAGGTGGAAGGAGAAAACAGGGGAAGGACAGTCTATGAATACAGAGCAAGAGAAGAGAATGTGAGAGAGGAAGAGCCAAGAAGGAAATACAGAGGCGTGAGGCAGAGGCCATGGGGCAAGTGGGCAGCCGAGATCAGAGACCCATTCAAAGCCGCCAGAGTCTGGTTAGGCACCTTTGACACTGCCGAGGCCGCGGCCAGAGCCTACGACCAAGCCGCCCTCCGTTTCCGGGGCAACAAGGCCAAACTCAACTTCCCCGAAAATGTCACGCTCCTCCGCCACGCGCCACCGCAAATCACTGCTTCTTCGCTCGTGGCCATTCCAACTTCCACCGAAGCCATTGTTCACAGTGAGCCTCTTATTAGCACTACTTTGCATGGTTTTTCTTTTTCTTCTTCTTCTTCCGCGGGTTTGTATGGGAATTTTCCCACCATGGATTCCACTATGACGGTTATGGCTTCAAGTGTGGCTTCTCATCTTCGTCATTCTTCTCTGTCTTCAACGCAAGCTTCGCCGCCGTTCTTGTCTTCCTCTTCTGCGTTCGGTTCCACTAAGCAGTTGCCGGCGGCGTNGTTGCCGGCGGCGTGGTCATCGGCTTCCGGTAACAGCTCTTCTTCGTCGGGATAG 1068 0.485 MCIAKVANPQEKGNKVVEKRELEVDERINNNNSTLSSSMHMIFPGLNREEEMSAMVSALTHVVSGEVPTSAGDDYSLPTSNMTYGSSTFSNYVVGSGSSSIKRTRQQDDISFVDHFSSSHGVTSSSPTTIHTTMNRECSRESGSGSGEVEGENRGRTVYEYRAREENVREEEPRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDQAALRFRGNKAKLNFPENVTLLRHAPPQITASSLVAIPTSTEAIVHSEPLISTTLHGFSFSSSSSAGLYGNFPTMDSTMTVMASSVASHLRHSSLSSTQASPPFLSSSSAFGSTKQLPAAXLPAAWSSASGNSSSSSG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01703 355 MobiDBLite consensus disorder prediction 121 156 - -
Adu10g01703 355 CDD AP2 176 235 IPR001471 GO:0003700|GO:0006355
Adu10g01703 355 PRINTS Ethylene responsive element binding protein signature 177 188 IPR001471 GO:0003700|GO:0006355
Adu10g01703 355 PRINTS Ethylene responsive element binding protein signature 199 215 IPR001471 GO:0003700|GO:0006355
Adu10g01703 355 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 47 347 - -
Adu10g01703 355 Gene3D AP2/ERF domain 175 235 IPR036955 GO:0003700|GO:0006355
Adu10g01703 355 SMART rav1_2 176 239 IPR001471 GO:0003700|GO:0006355
Adu10g01703 355 ProSiteProfiles AP2/ERF domain profile. 176 233 IPR001471 GO:0003700|GO:0006355
Adu10g01703 355 PANTHER DNA-BINDING DOMAIN 47 347 IPR044808 GO:0003700|GO:0009873
Adu10g01703 355 Pfam AP2 domain 176 225 IPR001471 GO:0003700|GO:0006355
Adu10g01703 355 MobiDBLite consensus disorder prediction 121 142 - -
Adu10g01703 355 SUPERFAMILY DNA-binding domain 176 234 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01703 Adu-Chr10 78410545 78413007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01703 170 243 AP2-EREBP Transcription Factor Family AT5G13330 71.605 1.06e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu10g01703 AP2 3.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01703 - - aip:107621817 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01703 10 78410545 78413007 Adu10g01703 10 78410545 78413007 ECH
Adu03g03109 03 115669357 115671611 Adu10g01703 10 78410545 78413007 ECH