Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01589 ATGGAAACTCTGAAAGCTGCGATTCCCGAAGGCCTGAAGCGCATGATTGGTGATAGCACCGTCGATGATCTTCGCGCCACCTCTTCCTCCCTCCACAGCTTCTTCCATCACTTCGAGCCCTTCCACCAGTTACTCACTGAACTCGTGGATCCCAAGCATGCTCTCTGCGGCAAGAGCAAAGACGCTGCGCTCGAATCCAAGCAGCTCGGAAACCAGTGCTTCTCCAAAGGAAATTACGCCAACGCTCTAGATTTCTATACTCAGGCATTGCGAAAGGCACCTTTTGAGGATGGTGATATGGAAAATAATCTGGTTGCAACTTTGTATATCAATCGAGCTACTGTATTGCATAAAATGAGTCTTTTGACAGAGTGTTTGCGAGATTGTACTCGTGCCCTTCAGATGTGTCCAAGCAATGCAAAGGCATGGTACAGAAGAGGTAAGGCAAATGCTTCCCTGGGAAATTATAAAGATGCGATGTGTGACCTAAATATGGCTAAAACTGTGGAATCATCATTGAGTGGGAAGAGACAAATAGAAAGTGAGGAGAAAAATATTTTCGACCAATGCAAGAGCACAAGCACAGTAAGACAACGTAAGGAGAACACCTTGACTACAGTGGGTGAGGTTCCCCAAGTAATGCTACAGTGTGTCAACATACCTGAGAAAGGAAGAGGCATGGTATCATCAAATGCCATTTCACCTGGTTCTTTGGCTCATAGTGAAGAACCTTATGCTGTGATAATATTAAAGCAATGCCGGGACAGTCATTGCCACTATTGCTTGAATGACCTACCTGCTGATAGGGTACCCTGTAGATCATGTTCAGTACCACTGTATTGCTCCCAGCAATGCCAGACACAGGCTGGTGGGCAAGTCTTAAGGATTTTCCCAGAAGTTCACAGCATTATTGAGAAGTTACCCAGTGACCTTGGAGAGTATGCTGACAAAGTTATTCAAGGCCATGATTCCAAATGTGAAACACAGAATATCACTGAACATAAGCATGAATGTCGTGGTGTAAATTGGTCTGCAGTACTACCATCAGAGGTGGTTTTAACTGGCCGAATACTGGCAAGGTTTTTACTAGAGAGGACATCAGAAAATATTACATACTTTGTGGAGAAGCTGGTAGCTGCATTGTCCATTGACGAAGTCACCATTTCCCAGGTTGTTATAATTATTTCTCAAATGAAAGTGAATTGTATGACTGTTGTTCGTTTAAAATCAAAAGATGCTTGTGGGCTATCCGATCAGTTCGGAGATTTTCCATCCTGTCCATACTTAACTAGTAATGTGGAACAGGTCAGGGTGGGTAAAGCTATTTATAAAGCTGGAAGTTTATTCAACCATTCTTGCCAACCAAATGTTCATGCATATTTTATTTCACGTAATTTGTGTATACGGACAACAAAAGCTATACCTGCTGAGGGTCATCTGGAGTTGTCTTATGGTCCACAGGTTGGGTTCTGGGATTGTAAAGATCGCCTTAATTTCCTAAAAGAGGAGTACATGTTTCAGTGCCAGTGTACTGGTTGTTCTGAAGTCAATCTATCCGACATTGTCCTCAATGCATTTTGTTGTGTCAATTCTAATTGTTTTGGTGCAGTCTTGGATAGCAGAGTAGTTAGCTGTGAAAAGCAGAAAATCAAGAATTTCATGAGACATTTAAAGATAGACAAGAATGATGACATTCATAAAGTGCTCAACCAAAATGATGCCTCCCATCATATTCAACCTGGATACTGTCTGAAGTGTGGTTCTTACCGTGATTTGGTGCCTTCACGTGCTGCAGTTGATAAAGCTTTAATATTCATAAAAAGGTTACAGGATGCAATATTATCAAAAGAAATTTTAAATACCACGATTGCAGATGCTTTGAGATCCTTGCATTTGCTAAGATCAAATTTGCATGCCTATAACAGGCTTATTGCAGAGGCAGAGGATAACCTTGCACAGGCCTTTTGTTTGTTGGGAGACTTTCAATTATCTATGGACCATTGTAAAGCATCCATCAAGATTCTAGAGAAGTTGTATCATCCTGATGATATAGTTATTGCATATGAACTTGTGAAGCTTTGTTCGATCCAACTTTCCGTAGGAGATGGTTCTGCAATGGATAGCATAAACCGGATTGGTGATATCTTCTCATGTTATTATGGACTTCATGCTGACTTGGTTTTCCCGTATCTTCAATACCTTAGGAGATAA 2211 0.4143 METLKAAIPEGLKRMIGDSTVDDLRATSSSLHSFFHHFEPFHQLLTELVDPKHALCGKSKDAALESKQLGNQCFSKGNYANALDFYTQALRKAPFEDGDMENNLVATLYINRATVLHKMSLLTECLRDCTRALQMCPSNAKAWYRRGKANASLGNYKDAMCDLNMAKTVESSLSGKRQIESEEKNIFDQCKSTSTVRQRKENTLTTVGEVPQVMLQCVNIPEKGRGMVSSNAISPGSLAHSEEPYAVIILKQCRDSHCHYCLNDLPADRVPCRSCSVPLYCSQQCQTQAGGQVLRIFPEVHSIIEKLPSDLGEYADKVIQGHDSKCETQNITEHKHECRGVNWSAVLPSEVVLTGRILARFLLERTSENITYFVEKLVAALSIDEVTISQVVIIISQMKVNCMTVVRLKSKDACGLSDQFGDFPSCPYLTSNVEQVRVGKAIYKAGSLFNHSCQPNVHAYFISRNLCIRTTKAIPAEGHLELSYGPQVGFWDCKDRLNFLKEEYMFQCQCTGCSEVNLSDIVLNAFCCVNSNCFGAVLDSRVVSCEKQKIKNFMRHLKIDKNDDIHKVLNQNDASHHIQPGYCLKCGSYRDLVPSRAAVDKALIFIKRLQDAILSKEILNTTIADALRSLHLLRSNLHAYNRLIAEAEDNLAQAFCLLGDFQLSMDHCKASIKILEKLYHPDDIVIAYELVKLCSIQLSVGDGSAMDSINRIGDIFSCYYGLHADLVFPYLQYLRR 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01589 736 ProSiteProfiles SET domain profile. 213 485 IPR001214 GO:0005515
Adu10g01589 736 SUPERFAMILY SET domain 202 515 IPR046341 -
Adu10g01589 736 Coils Coil 630 650 - -
Adu10g01589 736 Pfam SET domain 224 485 IPR001214 GO:0005515
Adu10g01589 736 Gene3D Tetratricopeptide repeat domain 493 735 IPR011990 GO:0005515
Adu10g01589 736 SMART tpr_5 106 139 IPR019734 GO:0005515
Adu10g01589 736 SMART tpr_5 140 173 IPR019734 GO:0005515
Adu10g01589 736 SMART tpr_5 645 678 IPR019734 GO:0005515
Adu10g01589 736 SMART tpr_5 63 96 IPR019734 GO:0005515
Adu10g01589 736 Gene3D Tetratricopeptide repeat domain 38 203 IPR011990 GO:0005515
Adu10g01589 736 SUPERFAMILY TPR-like 63 675 IPR011990 GO:0005515
Adu10g01589 736 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 378 735 - -
Adu10g01589 736 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 365 - -
Adu10g01589 736 Gene3D SET domain 375 484 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu10g01589 SET 9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01589 K24634 - gmx:100783548 1031.17