Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01573 ATGGATTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTAAATAATAACGATATAGATACCAGTGATGTGACTTGGCGTAGTAGCATCAACATCCCCTTAAGATTCCGCACTCCTCTTTCTCTTGTTCTCGAATATTCTGGCATCATGTGCTCAAACCCCGATGTTTCTTCTCCTGCACCTGCACCTGCACCTGCACCTGGAGATGGACCTTCAACAACTCATTTGCGCCCTAGGTCTCAGCTTCAATCTGGTTCTGGTTCTGGTTCTGGTGGTGCCTGCAGTGGGACTGGTGAAGTTCAAATTCGCATAATTGGTACTGGGGACCAAGACAACAATGATGTGATTGGTTCGGTTTCCTCTTCTTCGCAGCTGAGTCGTGTGTCTCGATCGGGCCATCTTAAGTGGCTGGAACAGCTTATCCCTTTCTCCCTCTTGCTGTTGGTGGTGTTCATTCGCCAGCATTTGCAAGGTTTCTTTCTCACAATTTATGTATCAGCTGTGCTGCTTAAATCAAATGAGGTGGTTAAGGAACAGACAGCTCTAAAGGGAGATCGGAAAGTCTCTGTTCTTGTTGGTATCTCAGTTGCCTTCATGCTCCACGTGATAGCCGTTTACTGGTTTCAAAATGATGATCTTTTATACCCAATTGCAATGCTTCCTCCAAAAGAAACACCGCTTTTCTGGCATGCAATATTCACCGTTTTGATCAATGATACATTGGTGCGGCAAGCAGCAATGGCTTTCAAGCTTTTGGTGCTAATTTTCTACAAATGTCGCAGAGGCCCCAGCTTCCGTCGGCAGGGTCAAATCTTAACTGCGGTTGAGTACGTGTTGCTGTTGTATCGTGCCTTGCTGCCAACACCAGTTTGGTATCGGTTTTTCTTGAACCATGATTATGGAAGTCTCTTTTCATCACTGACCACAGGGTTGTATCTAACATTCAAACTAACGACTTTAGTTGAGAAGATCCAAAACTTCTTTTCTGCCTTAAGACTATTATCGGGAAGGAAAGTCCAATATGGGGTTTATGCTACAAAGGAACAGGTAAAGTCTGCTGGTGACATGTGTGCTATATGCCAGGAGAAGATGCGAGCTCCGCTCTTGTTGCACTGTAAACACTTGTTCTGTGAGGAATGTGTGTCCGAATGGCTTGAGCGAGAAAGGACTTGCCCATTATGCAGAGCAAATGTAAAATCTGCTGATCTGCTCACCTATGGAGATGGTTCGACAAGTATTTTGTGTCAGTTGTTTTAA 1281 0.4426 MDFPSSSSSSSSSSSSSSSSSVNNNDIDTSDVTWRSSINIPLRFRTPLSLVLEYSGIMCSNPDVSSPAPAPAPAPGDGPSTTHLRPRSQLQSGSGSGSGGACSGTGEVQIRIIGTGDQDNNDVIGSVSSSSQLSRVSRSGHLKWLEQLIPFSLLLLVVFIRQHLQGFFLTIYVSAVLLKSNEVVKEQTALKGDRKVSVLVGISVAFMLHVIAVYWFQNDDLLYPIAMLPPKETPLFWHAIFTVLINDTLVRQAAMAFKLLVLIFYKCRRGPSFRRQGQILTAVEYVLLLYRALLPTPVWYRFFLNHDYGSLFSSLTTGLYLTFKLTTLVEKIQNFFSALRLLSGRKVQYGVYATKEQVKSAGDMCAICQEKMRAPLLLHCKHLFCEECVSEWLERERTCPLCRANVKSADLLTYGDGSTSILCQLF 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01573 426 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 346 412 IPR013083 -
Adu10g01573 426 MobiDBLite consensus disorder prediction 82 103 - -
Adu10g01573 426 Pfam Zinc finger, C3HC4 type (RING finger) 363 408 - -
Adu10g01573 426 SMART ring_2 365 402 IPR001841 -
Adu10g01573 426 ProSiteProfiles Zinc finger RING-type profile. 365 403 IPR001841 -
Adu10g01573 426 CDD RING-HC_RNFT1_like 364 403 - -
Adu10g01573 426 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 142 426 - -
Adu10g01573 426 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 130 - -
Adu10g01573 426 SUPERFAMILY RING/U-box 358 408 - -
Adu10g01573 426 ProSitePatterns Zinc finger RING-type signature. 380 389 IPR017907 -
Adu10g01573 426 MobiDBLite consensus disorder prediction 64 103 - -
Adu10g01573 426 MobiDBLite consensus disorder prediction 1 29 - -
Adu10g01573 426 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 142 426 IPR044235 GO:0061630|GO:1904294
Adu10g01573 426 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 6 130 IPR044235 GO:0061630|GO:1904294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01573 Adu-Chr10 69472901 69476633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01573 45 426 C3H Transcription Factor Family AT5G01960 53.428 2.74e-158 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01573 - K22379 gmx:100784614 467.233