Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01555 ATGGGAGCCGTTGTTGACTGTTATCCGCCGCACGCCGGCGAGGTTGCAGTTTTGTCTCTCAACTCGCTTCCCTTAGGTTTCCGATTTCGACCTTCCGACGAAGAGCTTGTTGATTATTATCTGAGACAGAAAATCAACGGAAATGGAGAAGAAGTCTGGGTTATTCGAGAAATCGATGTTTGCAAATGGGAGCCTTGGGACTTGCCAGATTTGTCGGTGATAAGAAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCACAGGACCGGAAGTATCCAAATGGTCACCGGTTGAACCGAGCAACCAATCATGGGTACTGGAAGGCCACAGGAAAAGATCGTAAGATCAAGTCAGGTTCCACCTTGATTGGGATGAAGAAGACTCTGGTGTTCTACACAGGTCGTGCTCCCAAAGGGAAGAGAACCAATTGGGTCATGCATGAGTACCGCCCCACCCTCAAGGAGCTTGATGGCACCAACCCTGGACAGAATGCGTATGTACTCTGCCGATTATTCAAGAAACAAGATGAGAGTCTTGAGGTTTCAAACTGTGATGAGGTGGAACAAACAGATTCCGCTCCCATGGCGGCCAATTACTCCCCTGAAGAAATACAGTCTGATCAGGCTCTGGCTGAAGTATCGCCGTCTCAAGTTACAGATGAGAAGCACCAGGGTGTTATCCCTGAGATCTCTGAGGAAGCGGTTTCCAACGTTATAACCTCTGCTGATTGCCATAGTGACGGATATGATGCTTGTGAAAGGCGAAATCAAGCTTTTGAACTACCTGCTGAGGACATTCCGCCGTTGAATTGGGACATATTCAATGACCCCGAGGACAAGATATTTGATGACAAATTATTCTCCCCAGTCCATAGCCATATTCCACCAGAATTTTACTACCAAGCAAACAATGAGACAAATATTGCAGACATCTTAAATTCTGTCAATTGGGATGAGATCTCCTATGAGGATCCCTATAGTCAAGCACAGAACAACTTTTTTAATAATGTTAAGCAAAGTGTATCAGGTAGCGAACCAGATGCAGGGCTGACCAATATGACAGTGAGTAACAGCTCTTTTGCTATTTATATTTTGGTCATTGTATTGAGTGTGGTTCATCAACCCTGA 1125 0.456 MGAVVDCYPPHAGEVAVLSLNSLPLGFRFRPSDEELVDYYLRQKINGNGEEVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGSTLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESLEVSNCDEVEQTDSAPMAANYSPEEIQSDQALAEVSPSQVTDEKHQGVIPEISEEAVSNVITSADCHSDGYDACERRNQAFELPAEDIPPLNWDIFNDPEDKIFDDKLFSPVHSHIPPEFYYQANNETNIADILNSVNWDEISYEDPYSQAQNNFFNNVKQSVSGSEPDAGLTNMTVSNSSFAIYILVIVLSVVHQP 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01555 374 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Adu10g01555 374 SUPERFAMILY NAC domain 18 173 IPR036093 GO:0003677|GO:0006355
Adu10g01555 374 Gene3D NAC domain 32 177 IPR036093 GO:0003677|GO:0006355
Adu10g01555 374 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
Adu10g01555 374 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 18 346 - -
Adu10g01555 374 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 18 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01555 Adu-Chr10 68788626 68792006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01555 15 215 NAC Transcription Factor Family AT4G35580 67.662 1.67e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu10g01555 NAM 2.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01555 - - gmx:100777071 524.628