Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01529 ATGGGTGAGGTAGTTGTGAGCGAGAGATTAGTTGGAACGGCTGAGGAAGAAGAGAAGCAGACGACTACGGTGGCGGCTGCCGAGGAAGAAACTACTGCAACGGCGGGAAAAGGCGGAGGAGGAGAATCGAAAGGGCTGATGAGGTGGGAGAAGTTCTTGCCGAAGATGGTACTGAGGGTGCTCTTGGTTGAAGCTGATGATTCCACGAGGCAGATTATAGCGGCGCTCCTCAGAAAATGCAGCTACAAAGCAGTGGCGGCTGTTCCTGATGGCCTAAAGGCATGGGAAATACTCAAGGGAAGACCACGCAATATCGATCTAATACTGACGGAAGTGGATTTACCTGCCATATCTGGCTATGCACTTCTCACTTTAATTATGGAACATGATATTTGCAAAAATATCCCTGTCATAATGATGTCCTCACAAGATTCTATAAGTACAGTATACAAGTGTATGCTGAGGGGAGCTGCTGATTATCTTGTTAAGCCCCTTAGAAAAAATGAATTGAGGAATTTGTGGCAGCATGTTTGGAGAAGGCAATCGTCAACTGTTGCCATGAATGGCCTCCAAGATGAGAGTGTTGCGCAGCAGAAGGTTGAAGCCACTGCTGAAAACAATGATGCTAGTATTCGTTCAAGTGGTGATGCTGCTTCCATTCAGAGAAATAAGGAATTAATCGAGAAAGGAAGTGATGCACAGAGCTCTTGCACAAAGCCCGACCTGGAAGCTGAGAGTGGCCCTGTCGATAACATGCAGGAATTTGCTTCACTGAAATGTGGTGAATCATATCCAACTGGAACAATGACACAAGAGGTAGAAACGTGCATGCGTTTGGGGCAGATATCAGTTATGCATGACAGTCATGCTGGAGGATTAGCTATGGCTAGTAGCAAAAATTGTGAGACAAGCACAACGAATGGCAAGGATGGCGATACAGAACATTTTCGGAGTGCTACTATCTGTGTCTCAAAACTCCCACAGTTAACTGCACAGGAACGGTATACAAACAAGCAATTTCAAGCCTCACCTGCGATTTTAAACTTCTCTGACCAACAAAGGGAACAGAGAACAAATTGCGAGAAAAGTATATCCCATTTTGCTACTGGGTGTAATTCAGAAAGTTCAACACCTAGTGTGCAAAGAAATCTTTTATCTCCAACTACACCCCAATCGAAAGAATCTGAAGCAGCAACTTCACACTCACAACAGCAAGGGCACTCTCTCCCGATTGCAGTTAAAGGTGTAAGGTTCAATGATTTGTGCACGGCCTATGGTTCTGTACTTCCTCCAATGTTTCGCACACAATCGGGTCCACCATTGGTGCCTAGCCCCAGTTCAGTTGTGCTTCTTGAACCAGCCTTTCAAGTAAATGGATTTTATCAATCAAGTGTTAAAGACAATAGTTCAGAGCAAGTTTATGAATCTCCCAGTTCTGGTGGAAAAAGTGCTCCAAACAACATGATTTCCAGACCGGAACACAAACCAGAACATGCTGAGGATCGAAGACATATCTCTCCTGCAACTGATCAAAGTGGATCCGGTAGCTTCTGTAATGGAAATGCAAGCCATCTTAATAGCATGGGGTATGGAAGCAACTGTGGAAGCAGCAACATTGTTGATCAGGTCCCAATTGGCAGAGCAGCTTCAGAGGGTAAGAATGAAGAGATGGCAAACAATGCGAGCTCTCATCGATCTATCCAAAGAGAAGCAGCTCTAAATAAGTTCCGCTTGAAAAGGAAAGAGAGATGCTATGAGAAGAAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGCCCGAGAGTGAAAGGTCAATTTGTTCGTCAAGTGCAGCCGGATGCACTCACTGCAGAGAAAGATGGCAAAGAATATGATCTTTAA 1887 0.4489 MGEVVVSERLVGTAEEEEKQTTTVAAAEEETTATAGKGGGGESKGLMRWEKFLPKMVLRVLLVEADDSTRQIIAALLRKCSYKAVAAVPDGLKAWEILKGRPRNIDLILTEVDLPAISGYALLTLIMEHDICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPLRKNELRNLWQHVWRRQSSTVAMNGLQDESVAQQKVEATAENNDASIRSSGDAASIQRNKELIEKGSDAQSSCTKPDLEAESGPVDNMQEFASLKCGESYPTGTMTQEVETCMRLGQISVMHDSHAGGLAMASSKNCETSTTNGKDGDTEHFRSATICVSKLPQLTAQERYTNKQFQASPAILNFSDQQREQRTNCEKSISHFATGCNSESSTPSVQRNLLSPTTPQSKESEAATSHSQQQGHSLPIAVKGVRFNDLCTAYGSVLPPMFRTQSGPPLVPSPSSVVLLEPAFQVNGFYQSSVKDNSSEQVYESPSSGGKSAPNNMISRPEHKPEHAEDRRHISPATDQSGSGSFCNGNASHLNSMGYGSNCGSSNIVDQVPIGRAASEGKNEEMANNASSHRSIQREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVQPDALTAEKDGKEYDL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01529 628 MobiDBLite consensus disorder prediction 467 486 - -
Adu10g01529 628 Pfam Response regulator receiver domain 60 172 IPR001789 GO:0000160
Adu10g01529 628 MobiDBLite consensus disorder prediction 595 628 - -
Adu10g01529 628 MobiDBLite consensus disorder prediction 370 408 - -
Adu10g01529 628 ProSiteProfiles CCT domain profile. 569 611 IPR010402 GO:0005515
Adu10g01529 628 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 322 IPR045279 GO:0009736
Adu10g01529 628 MobiDBLite consensus disorder prediction 1 43 - -
Adu10g01529 628 PANTHER POPULUS TRICHOCARPA PSEUDO-RESPONSE REGULATOR 5A MRNA 16 322 - -
Adu10g01529 628 PANTHER POPULUS TRICHOCARPA PSEUDO-RESPONSE REGULATOR 5A MRNA 331 602 - -
Adu10g01529 628 Gene3D - 56 278 - -
Adu10g01529 628 SMART REC_2 58 174 IPR001789 GO:0000160
Adu10g01529 628 PANTHER TWO-COMPONENT RESPONSE REGULATOR 331 602 IPR045279 GO:0009736
Adu10g01529 628 MobiDBLite consensus disorder prediction 467 517 - -
Adu10g01529 628 CDD psREC_PRR 60 164 - -
Adu10g01529 628 ProSiteProfiles Response regulatory domain profile. 59 178 IPR001789 GO:0000160
Adu10g01529 628 SUPERFAMILY CheY-like 58 186 IPR011006 -
Adu10g01529 628 Pfam CCT motif 569 611 IPR010402 GO:0005515
Adu10g01529 628 MobiDBLite consensus disorder prediction 10 24 - -
Adu10g01529 628 MobiDBLite consensus disorder prediction 491 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01529 Adu-Chr10 66945067 66949344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01529 45 263 Response Regulator Gene Family AT5G24470 66.516 3.58e-96 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Adu10g01529 Response_reg 5.9e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01529 K12130 - gmx:100784383 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01529 10 66945067 66949344 Adu10g01529 10 66945067 66949344 ECH