Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01518 ATGAGTGGTCGCTTTTCTCGCACAATTTATGTTGGTAATCTGCCCTCGGATATAAGAGAATCAGAAATAGAAGATTTATTCTACAAGTATGGCCGTATCATGGATATTGAATTGAAGATTCCACCCCGCCCTCCATGTTATTGCTTTGTTGAGTTTGACAATGCTCGAGATGCAGAAGAAGCAATTCGAGGTCGAGATGGGTACAACTTTGATGGTTGTCGTTTAAGGGTAATAAGCTGTGGCGGTGGTGGTGGTGGTGGTGGGGGCCGTTTTGGGGTATCACGCCATTCTGAATACCGAGTTATTGTTCGTGGACTTCCCTCTTCTGCATCCTGGCAAGATTTGAAGGATCATATGCGAAAAGCTGGTGATGTATGCTTTGCTGAGGTTTCCCGTGATAGCGAAGGGACTTTTGGCATTGTTGATTACACTAATTATGATGACATGAAATATGCTATTCGGAAACTGGATGATACTGAGTTTAGAAACCCTTGGGCAAGAGCTTATATTCGGGTGAGGAAGTATGAGGGTAGTCGTTCAAGGAGCCGCAGCAGAAGCCCCAGCAGGAGTAGAAGTCCTAAGAGGGATAGAAGTAGATCATTGGAGCGATCTCTGTCTAGGTCACGTTCTAGATCCAGATCCGCATCCCCAATCAAGGCTTCAAGGCCAAGATCACGATCGCGATCTGCATCACCACACCAGGTGCTATCAGGAAGTGCTTGA 723 0.4606 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNARDAEEAIRGRDGYNFDGCRLRVISCGGGGGGGGGRFGVSRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVRKYEGSRSRSRSRSPSRSRSPKRDRSRSLERSLSRSRSRSRSASPIKASRPRSRSRSASPHQVLSGSA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01518 240 MobiDBLite consensus disorder prediction 176 209 - -
Adu10g01518 240 Gene3D - 2 98 IPR012677 -
Adu10g01518 240 Gene3D - 99 176 IPR012677 -
Adu10g01518 240 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR SR34A 2 237 - -
Adu10g01518 240 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 77 IPR000504 GO:0003723
Adu10g01518 240 MobiDBLite consensus disorder prediction 210 240 - -
Adu10g01518 240 MobiDBLite consensus disorder prediction 176 240 - -
Adu10g01518 240 CDD RRM2_SF2_plant_like 99 174 - -
Adu10g01518 240 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 99 177 IPR000504 GO:0003723
Adu10g01518 240 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 101 163 IPR000504 GO:0003723
Adu10g01518 240 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 76 IPR000504 GO:0003723
Adu10g01518 240 SUPERFAMILY RNA-binding domain, RBD 6 169 IPR035979 GO:0003676
Adu10g01518 240 SMART rrm1_1 100 169 IPR000504 GO:0003723
Adu10g01518 240 SMART rrm1_1 8 78 IPR000504 GO:0003723
Adu10g01518 240 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 2 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01518 Adu-Chr10 66077172 66080052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01518 9 161 Eukaryotic Initiation Factors Gene Family AT4G34110 24.699 2.00e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01518 K12890 - gmx:100800653 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01518 10 66077172 66080052 Adu10g01518 10 66077172 66080052 ECH